Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03180 ATGGGAAAATCAACTAACAATAGCAAGGAATGGACACAGATGAACACGATCTATGGAATGGAGCAATGGCAAACCCTAATTTTTCTCTTATGTCAAGCAATTTTATTCTCAGTATTATCAGTTCTGTATTTCGTTTACTTTGATCCAATTTCCGGTTTCTTTGAGAAAATATTTACTGGAACCGCCGTAGCTAGATTCGCCGCTGGATTTACTGGCTCAGTAACAGCGCTATCTGCTTTATGTTTATTTTTCGCGGCGGCGAATTTCTTTTACTCCGCCGTACCGCTTCACTACGACATGGCACAACGGATCGTCTCCGCCGTTAACGACTGGTCATCGGTGAAACTCGCTCTGGATTTAGGTTGCTGCGGCCGTGGAATCCTCCTCAACGCGGTCGCAACGCAGTTGAAAAAAGAAGGAAGCTCCGGCCGTGTTGTCGGTTTAGATCGATCGAAGCGGACGACGTTATCGACGCTTCGATCGGCGAAAATGGAAGGTGTAGGTGAATACGTAACGTGTCGTGAAGGTGACGCGCGGCGGTTACCGTTTCCGGATAATTACTTCGATGTAGTGGTGTCCGGCGTGTTTGTGCATACAGTAGGGAGAGAGTATGGACAGAAGACGGCGGAGGCGGCGGCGGAGAGGATGAGAGTGGTGGCGGAGATGGTAAGAGTAATGAAACCTGGTGGTGTAGGTGTTGTGTGGGACCTAGTGCACGTGCCGGAGTACGTGCTACGGTTACAAGAATTGAAGATGGAAGATGTGAGAGTTTCGGAACGTGTAACCGCTTTCATGGTCAGTAGTCACATTGTTTCGTTCAGAAAACCGAGTCAGCACGTGCATGGACCCGCTGAGGTTCGCTTGGATTGGAGATTATGCTGA 882 0.4875 MGKSTNNSKEWTQMNTIYGMEQWQTLIFLLCQAILFSVLSVLYFVYFDPISGFFEKIFTGTAVARFAAGFTGSVTALSALCLFFAAANFFYSAVPLHYDMAQRIVSAVNDWSSVKLALDLGCCGRGILLNAVATQLKKEGSSGRVVGLDRSKRTTLSTLRSAKMEGVGEYVTCREGDARRLPFPDNYFDVVVSGVFVHTVGREYGQKTAEAAAERMRVVAEMVRVMKPGGVGVVWDLVHVPEYVLRLQELKMEDVRVSERVTAFMVSSHIVSFRKPSQHVHGPAEVRLDWRLC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03180 293 Gene3D Vaccinia Virus protein VP39 79 275 IPR029063 -
Trre11g03180 293 CDD AdoMet_MTases 118 238 - -
Trre11g03180 293 Pfam Methyltransferase domain 118 232 IPR013216 GO:0008168
Trre11g03180 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 246 IPR029063 -
Trre11g03180 293 PANTHER EXPRESSED PROTEIN 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03180 Trre-Chr11 43200410 43201291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03180 - - gmx:100804520 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03180 11 43200410 43201291 Trre11g03180 11 43200410 43201291 ECH