Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02530 ATGGAATCAGTGAAACCTTCAGCAGTGACACCAAGCATGAAATTAGCTAGAAATTTTGCTAAAGTTCTTAATCTTAGAGTATTTTTGAAGAATGTTACTATAGCTGATACAAATCCAAAAGATGAAACCAACATGGATCATAAGACTACAATAAATTGGTCTGAATCATTCAACAAAGTTGATGAAGATGAAGAAATTGAAGAACAAAGAGTTGCAACAGAAGCACTTCTTGCTAAGCTATTTGCTAGCATTGCAACAGTTAAAGGTGCTTATGCTGAACTTCAACATTTTCAATCACCTTTTGATCCTGATGGAATTGAAGCTTCTGATAAGTTACTAGTTTCTGAGTTGAAGCATTTGTCGGAGCTGAAACAGTGTTACTTGAAGAAACAAGTTGATCCTTCGCCAGAGAAAGCGATACTCGTAGCTGAATCGAAGGAGATAAAGGGTGTTATAAAAACATATGAGATTACGGCGAAGAAGTTGGAATCGCAGGTAAGGCTTAAAGATTCTGAGATTATGTTTCTTAAAGAGAAATTAGTGGAAGCTAATAGTCATAATAAGTTAATTGAGAAGAGATTGAATCAAAGTGGATCATTATCTGGTGTACTTGAAAATAGTAATCTTCACATATCAGGGTTAAGTCCTAGCCATTTTGCTACCGTTCTTCGTCACGCTGTTAAGTCGATTCGTAACTTTGTGAGGTTAATTGTTGATGAAATGAGATCTGCAAAATGGGATATTGATGCTGCTGTTGATGCTATTGAACACAATGTTGTTTACATCAATGAAGATCACAAGTGTTTCGCAATCGAATCATTTGTTTGCAAAGAAATGTTTGATGCATTTCACTTCCCTAATTTCAATCTTCCAAATGAGTCACTTCCAAGTGATAGAAAAAATCAACAAAATTGGTTCTTTGAGAATTTTAATGAGCTGAAATCAACTAAAGCTAAAGACTTTCTTGCTGAGAAACCGAGATCATTGTTTGCGAAATTCTGCAGGAACAAGTATTTGAGGCTTGTTCATCCGAAAATGGAGTCATCGTTTTTCGGTACCATGCTTCATAGAAACCTTTTGAGTGGTGGAGAGTTTCCAAAAACTGATTTTTTTGCTTCATTTGCTGAAATGGCCAAAAGGGTTTATCTCTTACATTGTTTAGCTTTCTCTTTTGAGATTCAAGCTGAAATTTTTCAAGTTGGAAAAGGGTGTAGATTTTCTGATGTGTACATGGAAAGTGTGAATGATGAAATGTTTGTGTTTTCAGACAAGACAACAACATTTGATGAATCAGAAGAAGAAACAGTTGTTGGTTTCACTGTTGTTCCTGGTTTTAGGATTGGTAAAACTGTTTTACAATGTCAAGTTTACCTCACAAAGACGAAGAATCAAACCAAGGTTAAAAAAACGGTGAAAGGATCGCGATCACATGCAGGTCCAAGTTTACGTAGTAGTTAA 1458 0.3539 MESVKPSAVTPSMKLARNFAKVLNLRVFLKNVTIADTNPKDETNMDHKTTINWSESFNKVDEDEEIEEQRVATEALLAKLFASIATVKGAYAELQHFQSPFDPDGIEASDKLLVSELKHLSELKQCYLKKQVDPSPEKAILVAESKEIKGVIKTYEITAKKLESQVRLKDSEIMFLKEKLVEANSHNKLIEKRLNQSGSLSGVLENSNLHISGLSPSHFATVLRHAVKSIRNFVRLIVDEMRSAKWDIDAAVDAIEHNVVYINEDHKCFAIESFVCKEMFDAFHFPNFNLPNESLPSDRKNQQNWFFENFNELKSTKAKDFLAEKPRSLFAKFCRNKYLRLVHPKMESSFFGTMLHRNLLSGGEFPKTDFFASFAEMAKRVYLLHCLAFSFEIQAEIFQVGKGCRFSDVYMESVNDEMFVFSDKTTTFDESEEETVVGFTVVPGFRIGKTVLQCQVYLTKTKNQTKVKKTVKGSRSHAGPSLRSS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02530 485 Coils Coil 159 179 - -
Trre11g02530 485 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 459 IPR040225 GO:0009639|GO:0009959
Trre11g02530 485 Pfam Plant protein of unknown function (DUF641) 70 193 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02530 Trre-Chr11 31309194 31310651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02530 - - gmx:100810236 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02530 11 31309194 31310651 Trre11g02530 11 31309194 31310651 ECH