Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02477 ATGGCGATGATGCAACCAGCTATAAGGCAGAGACGCTCTCAGACGACGGATCCATCGGCATCATCATCGTCGTCGTCATACTCAAAGCTCGACAAAGCGGCGAAATCGGACGGTAAAGATGAAGGGTTAAACTGGGTATTACCATTTGTTGCTTTGGGATTTTTGAGATATATGAGTGCTACTTCTAATATCATTCATGATTGTGATGAAGTTTTCAATTATTGGGAACCTCTTCATTTTCTTCTCTATAAAACTGGTTTCCAAACTTGGGAATATAGTTCACAGTTTGCTCTTCGGTCGTATTTGTACCTTTTATTCCATGAAATAGTGGCTCGACCAGCATTGTGGTTATTTGGTGACGAAAAAGTGAGAGTGTTCTATGCTGTGAGATTTTTTCTCGGTTTTCTCTCTGTTGTTACAGAGACCGTTCTTGTGGTAGCTGTTTCAAGAAAGTATGGAAAACGACTCGCTTCTTATACACTTGCTATGCTTTGCTTAGCAAGCGGTTGTTTCTTTGCTAGTACAAGTTTCTTGCCCAGTTCGTTTTCCATGTACGCAATCTCTCTTGCATCGGGCTTATTTCTTCTCGATAAACATGCTGCAGCAGTTGCTGTTTCTGCTATTGGTGTGATACTTGGCTGGCCATTCTCAATCTTGGCTTTCGTTCCAGTGACACTTTATTCTCTATATATAAAATTCAAACCGGCATTTATTGCTGGGGCTGTCACATCAGTAATTCTTCTTGCATTGTCTGTAGTTACTGACTATTACTATTATGGAAAATGGACTTCATCTGTCTTAAATCTTCTAATATACAACGTAGCTGGAGGCGGTGAAAGCCATCTTTATGGGACTGAAGGACCTCTTTTTTATCTGAAGAATGGATTTAACAACTTCAACTTTTGTTTTGTTCTTGCTATGCTGTTCTTGGCAATTTTGCCTATTGCTAAGAGGAAATATGCGCCAGACCTACTGATTGTGATATCTCCTTTATACATTTGGTTGGGCTTTATGTCTTTGCAAGCACATAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTTATTTGTCTTGCTGCTTCTGCTGTCATCGAGAGCTTTCCTGATCTTTTCCGTGACAAGTATGATTCATTTGACACTTCTATAATAGTGAAGGTAGCCAAGTTTCTTAGGCCGGTGGTTCTTAGCATTATATTATATTCCTCTCATGCTCGTACATTTTCTCTGATTCATGGTTACTCAGCACCTATAGAGATTTACAAGCTTTTAGAGCACCACGACGATGTAGCAAATGGTTCTGTACTTTGTGTTGGAAGTGAATGGCATCGCTACCCATCATCATTTTTTGTCCCAGATTTTGTAGGACAAGTTCGATGGATCGATGATGGTTTCGGAGGTCTTCTTCCTTTCCAATTTAATTCTACCCTAGGTGGGACTGCTGCAGCACCACCATACTTTAACAACAAAAACAAGGCATCAGAAGAAGAACAATACCTCCATGATATCGATGCCTGCACATTCCTTGTTGAGTTGCAGCTAAAGCGGCCTTACCTTACCCGAGGAAGCGACTTATCAACATGGGAGGCTATTGCTGCATTACCTTATCTGGATAGAGAGCTTTCACCAGCTTTGTATAGGTCTTTTTTCATCCCTTACCTTTGGCAAGAAAAGAATGTTTTCGGCATGTATAAACTGTTCAGAAGGATAACCAAATGA 1716 0.4033 MAMMQPAIRQRRSQTTDPSASSSSSSYSKLDKAAKSDGKDEGLNWVLPFVALGFLRYMSATSNIIHDCDEVFNYWEPLHFLLYKTGFQTWEYSSQFALRSYLYLLFHEIVARPALWLFGDEKVRVFYAVRFFLGFLSVVTETVLVVAVSRKYGKRLASYTLAMLCLASGCFFASTSFLPSSFSMYAISLASGLFLLDKHAAAVAVSAIGVILGWPFSILAFVPVTLYSLYIKFKPAFIAGAVTSVILLALSVVTDYYYYGKWTSSVLNLLIYNVAGGGESHLYGTEGPLFYLKNGFNNFNFCFVLAMLFLAILPIAKRKYAPDLLIVISPLYIWLGFMSLQAHKEERFLYPIYPLICLAASAVIESFPDLFRDKYDSFDTSIIVKVAKFLRPVVLSIILYSSHARTFSLIHGYSAPIEIYKLLEHHDDVANGSVLCVGSEWHRYPSSFFVPDFVGQVRWIDDGFGGLLPFQFNSTLGGTAAAPPYFNNKNKASEEEQYLHDIDACTFLVELQLKRPYLTRGSDLSTWEAIAALPYLDRELSPALYRSFFIPYLWQEKNVFGMYKLFRRITK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02477 571 MobiDBLite consensus disorder prediction 1 29 - -
Trre11g02477 571 Pfam Alg9-like mannosyltransferase family 49 451 IPR005599 GO:0016757
Trre11g02477 571 PANTHER GLYCOSYLTRANSFERASE 49 545 IPR005599 GO:0016757
Trre11g02477 571 MobiDBLite consensus disorder prediction 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02477 Trre-Chr11 29840355 29845863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02477 9 571 Glycosyltransferase AT1G16900 73.852 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02477 K03846 - gmx:100805971 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02477 11 29840355 29845863 Trre11g02477 11 29840355 29845863 ECH