Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02397 ATGGATGTGAAGAAAATAGTTGTGGTTGTAGAAGATGTAGATGAAGCTAGAACAGCTCTAAAATGGGCTCTAATAAACATCATTAGACATGGTGATATAATCACACTTCTTCATGTTTACAATTCCTCTAATTCTAACACAAGATCAAAAAGAAGTAGAAGCCGAGCTCGTCTTCTTCGCCTCGACGGTTTTCGATTAGCACTTTCCTTTCAAGACATTTGCAACAATTATCCTAATACAAAGGTTGAGATTATTGTCACAGAAGGAGACCAAGAAGGAGCAAAGATTGCTTCTACTGTTAGAGAGATTGGTGCTTCTATGCTTGTTGTTGGACTCCATGATCATAGTTTTCTTTACAAATTCGTAATGGCCCATTCCCACATCAATTTCAACTGCAGAGTACTTGCCATTAAGCAGCCTCATCATGGTGACCCACTAAGGCCCATGATATCATCAGTAGCTGTTGTAGATAGTTCAACCAACTTGGACTTTTCACAGATTGACATTTCTAATTTACAAATACCTCATACACCTTCACCAAAAATTCGATACAGAATCTGTCCAAACCCATCTGCAATTATTTGGAGATCAAGGAAAACAAGAAGAAGCTGA 612 0.3807 MDVKKIVVVVEDVDEARTALKWALINIIRHGDIITLLHVYNSSNSNTRSKRSRSRARLLRLDGFRLALSFQDICNNYPNTKVEIIVTEGDQEGAKIASTVREIGASMLVVGLHDHSFLYKFVMAHSHINFNCRVLAIKQPHHGDPLRPMISSVAVVDSSTNLDFSQIDISNLQIPHTPSPKIRYRICPNPSAIIWRSRKTRRS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02397 203 CDD USP_Like 16 123 - -
Trre11g02397 203 Gene3D HUPs 2 143 IPR014729 -
Trre11g02397 203 Pfam Universal stress protein family 4 123 IPR006016 -
Trre11g02397 203 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 202 - -
Trre11g02397 203 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02397 Trre-Chr11 28533026 28536395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02397 - - gmx:100778166 290.041