Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02311 ATGCGGCGTCGGGCAGCCGAGTTTCGGCGCCCGATTAGACGGATGTTGTCTTATGGGATCTGTTTTCTTCTTGGAGCGTTCTTTGTTGTCGGTTTGGTTTTGTTTTTTGTTCAACATAATTACCATCAAGATCGGGTCCACCAACATCCTTTTCTGGAAAGGAATCAAAATGTTGAACGTTTTTCAAAGGATAGAGTGAATTTACCCGAAGAAAGTTTGTATGCAACATCTCTTTCAAGGCAATTATCGGAGGAAATGGTTCTGGCGAAAGCTTATGTGGTTATTGCCAAAGAACACAATAATCTTCACCTAGCATGGGAGCTTAGCTCAAAGATTAGAAGTTCTCAGCTTTTGCTTTCAAAAGCCGCCATGACCGGAAAGCCGATTGTCAAGGAGGAAGCCGAACCGATTATTAAAAGCCTATCTTCTTTAATTTTCAAGGCACAAGATATCCATTATGACATTGCAACCACTATAGTTACAATGAAATCACATATTCAAGCACTTGAAGAGCGAGCGATTGCGGCGACAGTTCAAAGCAACGTGTTTGCTCAAATATCGGCCGAAGCACTACCGAAGAGTCTTCATTGCATACATGTGAAACTTACTGAGGATTGGCTAAAGAAACCTTCCCTGCAAAAACTTGCAGATGAGACGAGAAACTCTTTACAGCTTACGGATCAGCATCTATATCATTTCTGCATATTTTCGGATAATGTACTGGCAACATCGGTTGTTGTTAATTCAACAGTTCTTAATGCTGAATATCCAATGCAGTTTGTTTTTCATATTGTAACTGATGGTGTCAACTATGGAACGATGCAAGCGTGGTTTCTTAGTAATGACTTTAAAGGTGCAACCATAGAGGTGCAGAATGTCGAGGAATTTCATTGGCTGAATGAATCTTATTCTCCGATTGTGAAGCAGCTGCTCAATTCCGAATCTCGAGCCTTTTATTTTGGTGCATATCCAGAGGTCAATGCTGAACCAAAATTGCGGAACTCCAAGTTTTTGTCTTTACTTAATCATCTTCGGTTTTACATCCCCGAGATTTATCCACAACTTGAGAAGATTGTCTTCCTTGACGACGATGTTGTCGTCCAGAAAGACCTAACACCACTTTTCTCACTTGAGTTGAATGGAAACGTAATCGGAGCAGTCGAAACCTGTCTTGAAGCATTTCATCGTTACTACAAGTATCTCAACTTCTCAAATTCAATCATAAGCTCAAAGTTCGACCCACAAGCATGCGCCTGGGCATTAGGTATGAATGTTTTTGATTTGGTTAAATGGAAGAAAGCAAACGTAACCGCAATATATCACTATTGGCAAGAGCAGAATGCTAAGGGATCGCTCTGGAAGCTCGGTACACTTCCTGCTGCACTTCTTAGTTTTTATGGTTTAGCCGAACCACTTGACCGAAGATGGCATGTTTTAGGTTTAGGTTATGACTTAAATATCGATAATCGGCTCATTGAAAGTGCGGCTGTTATTCACTTCAATGGGAACATGAAACCATGGCTGCGATTATCTATAAGTCGGTATAGGCCACTATGGCACAAGTACATAAATCAAAGTCACCCTTATTATCAAGAATGTGCAATAGGTTAA 1611 0.4072 MRRRAAEFRRPIRRMLSYGICFLLGAFFVVGLVLFFVQHNYHQDRVHQHPFLERNQNVERFSKDRVNLPEESLYATSLSRQLSEEMVLAKAYVVIAKEHNNLHLAWELSSKIRSSQLLLSKAAMTGKPIVKEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERAIAATVQSNVFAQISAEALPKSLHCIHVKLTEDWLKKPSLQKLADETRNSLQLTDQHLYHFCIFSDNVLATSVVVNSTVLNAEYPMQFVFHIVTDGVNYGTMQAWFLSNDFKGATIEVQNVEEFHWLNESYSPIVKQLLNSESRAFYFGAYPEVNAEPKLRNSKFLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLELNGNVIGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWALGMNVFDLVKWKKANVTAIYHYWQEQNAKGSLWKLGTLPAALLSFYGLAEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLRLSISRYRPLWHKYINQSHPYYQECAIG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02311 536 Pfam Glycosyl transferase family 8 233 509 IPR002495 GO:0016757
Trre11g02311 536 FunFam Hexosyltransferase 233 529 - -
Trre11g02311 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 64 535 IPR029993 GO:0047262
Trre11g02311 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
Trre11g02311 536 CDD GT8_like_1 231 524 - -
Trre11g02311 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 533 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02311 Trre-Chr11 27541550 27544860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02311 1 533 Glycosyltransferase AT2G20810 51.107 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02311 K13648 - gmx:100817381 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02311 11 27541550 27544860 Trre11g02311 11 27541550 27544860 ECH