Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02302 ATGTCATCATCAACAACAACACCAATTCTGAAAGATGAATTAGACATAGTGATTCCAACAATAAGAAACCTTGATTTCTTGGAACAGTGGAGACCATTTTTCCAACAATATCATCTAATCATTGTTCAAGATGGTGACCCTTCTAAGGTCATTAAGGTTCCTGAAGGTTTTGATTATGAACTTTATAACAGAAATGATATTAACCGCATTTTGGGTCCTAAAGCTTCTTGCATTTCATTCAAAGATTCTGCTTGTCGTTGCTTTGGTTTTGCTGTTTCCAAAAAGAAGTATATCTTTACTATTGATGATGATTGCTTTGTTGCAAAAGACCCAACAGGCAAAGAAATTGATGCCCTGCAGCAGCACATCAAGAACTTGCTGACTCCATCAACTCCATTTTTCTTCAACACTCTCTATGATCCATATAGAGAAGGTGCTGATTTTGTTCGCGGATATCCTTTCAGTCTTCGTGAAGGTGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCTCCAACTCAGCTTGTCAAGCCTCTTGAAAGAAACAATAGGTATGTGGATGCTGTTCTGACAATACCAAAGGGAACCCTCTTTCCCATGTGTGGTATGAATTTGGCATTCAACCGCGAATTAATTGGTCCTGCATTGTACTTTGGACTCATGGGCGATGGCCAACCTATTGGTCGCTACGATGATATGTGGGCTGGCTGGTGCATGAAGGTGATAAGTGACCATTTGGGATTAGGAGTGAAAACAGGTTTACCATATATCTGGCACAGCAAAGCAAGCAATCCATTTGTGAATCTTAAAAAAGAGTACAAAGGAATTTACTGGCAAGAAGAGCTTATCCCATTTTTCCAATCTGTTTCTCTTTCAAAAGAAAGCACAACTGTTCAGAAATGTTACATTGAACTCTCCAAAAAAGTTAAGGCTAAACTTGGATTAGTTGATGATTACTTCAACAAGCTTGCAGATGCTATGGTTACTTGGATTGAAGTTTGGGATGAACTTAACCCATCTGAGGAAAAATCTGTTACTTTGCCTAATGGTATAGCAAAGTAG 1080 0.3907 MSSSTTTPILKDELDIVIPTIRNLDFLEQWRPFFQQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGFAVSKKKYIFTIDDDCFVAKDPTGKEIDALQQHIKNLLTPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNNRYVDAVLTIPKGTLFPMCGMNLAFNRELIGPALYFGLMGDGQPIGRYDDMWAGWCMKVISDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLSKESTTVQKCYIELSKKVKAKLGLVDDYFNKLADAMVTWIEVWDELNPSEEKSVTLPNGIAK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02302 359 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 245 IPR029044 -
Trre11g02302 359 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
Trre11g02302 359 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Trre11g02302 359 PANTHER UDP-ARABINOSE MUTASE 1 349 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02302 Trre-Chr11 27426799 27430376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02302 K13379 - gmx:100816315 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02302 11 27426799 27430376 Trre11g02302 11 27426799 27430376 ECH