Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02296 ATGTATAATAATCAAGTGAATCGCGGTCCGAACTCAGGACAGAGTTCTGCCCCTCTACCTCCGGCTGCCCTGCCGCCACCACCACCACTACCACCGGGTTATCAGCAGGCACTGCCACCTCCACCGCCGCCTCATTTTCAGCATTTTGTCCCACCAGTGCCACCACCACCAGCTCCATCAGCAGCTCCCCATGTTTATTTACATGGAACCCCTTCTACGCCAAATACAAGACCTTCATATTCCATCCCTTCTCAAATGGCGCCGCAAACATTCCCTATCCTTGGACAAAATTCACAACATTCTTCTAATTTAGGCGTCCATAGTCATACCATTTCGCCCTCGGTTCCTACTCCTGTTGGCCGCTCACATCAGGACACATCTTGGGCTCCTGGGCTGCCAAGTAGAGTGTTGCCACCTCCTCCCTCTTCTTCCCAAGGACAAATTTTGCAAAATCAACATCTTCCTGCACCGCCACCACCCCCTTTTCGTGCTCCGTCTCCTGATGGAGTTTATTTCCATTCTACTGTTGGGAATTACCAAGTACCTTCTGTTGTTCCTCCACTGCCACGGCCACCATTGCCAACCTCTCCACCACCAGTTCTGCCATCTCCACCACTTCCTACCTCTGTGACGACTTCTACATCCTCCCATGCTGCATGCACTGATGTCCCGAACTCTAAGAAGAATCCTAGCTTTGAATCAAAGGATGTGGATTCAGCAGATGAGTTTGTCGCTTCATGTCTATCTGGTATTGTGCCGGTACATAATTCTGATTCTGACGCCAATCGGGATGGTGGAAATTGTAGAGAGGTAGCGCCAGTTTCCCTCAGAGATGAGCCAACTAGAAGTATGATGAGTATTCCCTCTCCTCCACCCAAGCCAGCAGAAGAAAATACTGTAGGCGCTGATTCTGACATGGAGATGGAAGATGATATCACGCTTTCTGACAAAGACCAAGGATCAACTTATGCAATTGAAGTGGTAACTCAGCAGCATGATCGGGTTGATGAGGTTAGCATGAATGAGAAAATACAGCTGCCGCAGAATTCAACAGAAAACAAACCTGCCAAGACAATCTTATCCAGTGATGCATCATGCTTTGGATCTACAGGAGTCAGCAAACAAAATGAAGGACCAGGACCTTCATCCGATGTTGAGCCCATGAAATCTGCAAGATCAGTTACCAAGGTTCTTAGTCCCATGAATGACTCAGTGGAAGTAGCTGAATCACTCCCGAGCACTGGGTCGGGAAGATTGGCAGCTCCTCTAGACAAGGAATTTATAAGATATGGTACTTCTGATCATAGCGAAGCCACTGATCCCAACAGAGATTCTGAGCAACTTATGCGGATTGGCAGCCCAATAAGACTTCTTCAAGACTATGCTTCTGATGGAACTTCAGATAATGAAGATGAAGGCCGTACAAAAGATGCGAATAATGTTTTTACAGTCTCTGCAGGAGCTGTTCCCCGTGTCCCGGATGCCCGTAAAGATTGTGAGAGTAATTTGGAGACTGACATGGGATTTAAACGTTCCTCCTATAGTCAAAAGGAGATTGAGTTGTTCTCCAAATCTTCACAGAATAATTCAGAAATATCTCCATGTTTAGTACAAGAATCCGAGGAAACCTGTAAAAGATCCGCGTCACATACTACTGGTGATGGATGTGTTGATGGATTTGGTGATACTGGCTTTAACATTGATGGTAAGAGTGGTACTGCTGAACAGGAACATGAGAAGGAAACCTCAAAGTTTGAACCAACTGGTCTGAAAGTAGATGAATTCGGGAGGCATATCAGAGAAGGTGCTACAGATAGTGACTCTGATGAATCTCGCAGTCGTCGTACTAGGAGGATGAAAAAAAGAGATAGAAGCCGGAGTCGCAGCAGGTCTCGATCTCCGGTAGACAGGAGGAGTAGAAGAAGAAGAAGTCCTCGGAGGAGAAAGGATAAAAGAAGCCAGTCTCGCAGCTGGTCTCCTCGGCGGCGTCGAAGCAGGAGTAGGTCTCCAATCTTAAGACGTTCAGGTGACATTCACAATGAGAATGTGAGAAGGGACAAGGACAAGGCTCAATGTTTTGATTTCTCACGTAGAAAGTGCTATCGTGGAGCATTATGTAGGTTCTCTCATCATGAATCTGACAGGAATGCTACATCAAGGCGCTCTAGGAATAAACATGATCTGGAACCTTATTCTCGTGAAAAAAGTTCTAGGATTAATGAAGGAGTGAAGAGTATTTCTTCTAAAGTGTCAGATCATGAGTATGATGGAGTCACAATTCAGGACATAGATCGTCACCAGAATATAACTGGCCAGGAAGTAGTGCAAAAAATGGAAGATTCTGAGGGCCAGGCTGTTGTGTCTACTACCTTTGGTCAATCGGTTAATTGCAATCCAAGCTCTGAAGGCGTCAGAGAGGTTTCTCCTAAGGTGCAGGAAAACTTAGTAGTTATAGAAAAGCCAGAAACTTCAATACATAATAATGATAGTTCTCAGAACACAGTAAATTCTCATCAGCAGCACTTGGTTGATGACTTTCAGCCTGAGGCTTTAAGCAGTGCTGATGCTGCTAAAGATTTTATTCCCTCAGAAGGTGGTTCATTTGTTCAGCAACTACATTCCAATGTTTCTGTTGATGTAAAAGAACATTCTGGTGGTGCATCTAAAGATATTATTCGTTCAGAAGACGACTCATCTGTTCAGAAACTACAGTCCAATGTTTCTGCTGAAGTTCCAGAACATTCTGGTTACCCTTCTCAGCTTCTAAATGCGGCCTGCGTGAATGATTTGTCATCCGATAAAAGATCAATGATTTCTGCTAATGAGGTTTCTGGTAGTGAACCTTTACCATGTACATCATCTTCTACACAACTACAGCCAGTCACTAGTGCTGTTGGTCCATCAGAGCAGCCTTCATTGCATTCTCAGGCTTCTAAAGAGTTACCTCCACAAAGTGTTTCATCAGTGGAATTTCCACTTCATACTTACCCATTGCCTGCTTTTGTTGGTTCACATTCCCAGGGTGAAAATGCTGTGCATATACCACAAATTCCAAGGCAATATGGTGTGATGCAGCAAAATGCACTCTTTCCTTTCCAGTCCACTGCCAGAGAAAACTTTGAACCTTACCCAGCTCCATTACAGACACCAAATTCTCATTTCAGTGGACCACCTCATAGCTCTTGGACATCCTTGCCGCCGCCACCGCCGCCACCATCACATACGGTGTATAATACCAGTTCAAACATGGGAGTTGCAAAATCATTCATTTCTTCAGAATTTAATCAGAATCAACTGCATTCACGAACTGACTATGTTTCTCAGAATTCCATGATTCCCGGATTACCAACTCATTCTCAAAGTTCAAAATTTGAGGATCAAGTTTATCCTCCAATGCAGGATCATTCGCGAACTTTCATGCGCACAGAACCTTTCTCTCCCAAGCATCTCCATCAGGGGAACCCGGCATACCAATCGCTTTCAAGCTCCACATCTTTTGGCGGCCTGCATCATCAACCAAAACAATTTTCTTGGGAGTCAGATGTGAACAGACCACAGCCTCCTTTGGGTGGTAGGTTGCCTCCTGAAGGACATTTCAGCACATCATCCCTCACTCGTCCATTATCACAGCAGCACCAATCAGCTCATAATTTTCAATATACTTCATCCGATGTTAATTTGGCTGGACCTGGAGGGACTGCTACTGTATCCAGATATCCACCAGATGTTCCTGATAGCAATCATTCAACATCTCTTCCGGGTTTTGGAGCATCAAGAGCTTCTGCTCACTATAATCCTTATGCATCGACCTTTGAGCAGCCACTAAGTTCAAAACTCAGTTCAAACTTTTTACAAGACAATGATATGATTTACGGTAATAATTATGGTCCTTCTAGATATAGGGAAGGGGATGGTGTTGGATCAAGAGAGACAGCATCGCCAAAACCAGCAGGAGCTGTTGGTCAGATCTTGCCAGGGCCTGGTGAACAATATGATCCAATTTTTGACAGCATTGAACCATCATCCTCTTTGAAGAAATTTGATTTTGAGCAGAAGCAGGAAGTTACAGGTGAATCTAATATCAGCCTAAGGCCTAAAAGTTCTCAAATGTCTTTGGATGCCAAAGAGAAGAAGCATGGGAAGGTTGGGGCTGTTGCCTCTACCAGTTCTCTAAATAATGATGAATATGGTGAAACAGCAGATGCTGAGGTGGGTGCTGTTGAAAATGAGAGCCTGAGCAATGATATGGATGATGCAAACTTATCTCCGGGGGAGGATGAGATTAATCAGATAAAATCTCCAGGGAAAAGAAAGAAGAGCAAGGATTCCAGATCAATGAAATTGTTCAAAGTTTCCATTGCAAACTTTGTGAAGGAGGTTTTGAAACCATCATGGAGACAGGGTAATATGAGTAAGGTGGCTTTTAAAACCATTGTGAAAAAGACTGTAGATAAGGTGTCGGGAGCTATGAAAGGCCACCGTATACCCAAATCTCAAGAGAAGATAACTCAATACATTGACTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTGTGA 4584 0.4428 MYNNQVNRGPNSGQSSAPLPPAALPPPPPLPPGYQQALPPPPPPHFQHFVPPVPPPPAPSAAPHVYLHGTPSTPNTRPSYSIPSQMAPQTFPILGQNSQHSSNLGVHSHTISPSVPTPVGRSHQDTSWAPGLPSRVLPPPPSSSQGQILQNQHLPAPPPPPFRAPSPDGVYFHSTVGNYQVPSVVPPLPRPPLPTSPPPVLPSPPLPTSVTTSTSSHAACTDVPNSKKNPSFESKDVDSADEFVASCLSGIVPVHNSDSDANRDGGNCREVAPVSLRDEPTRSMMSIPSPPPKPAEENTVGADSDMEMEDDITLSDKDQGSTYAIEVVTQQHDRVDEVSMNEKIQLPQNSTENKPAKTILSSDASCFGSTGVSKQNEGPGPSSDVEPMKSARSVTKVLSPMNDSVEVAESLPSTGSGRLAAPLDKEFIRYGTSDHSEATDPNRDSEQLMRIGSPIRLLQDYASDGTSDNEDEGRTKDANNVFTVSAGAVPRVPDARKDCESNLETDMGFKRSSYSQKEIELFSKSSQNNSEISPCLVQESEETCKRSASHTTGDGCVDGFGDTGFNIDGKSGTAEQEHEKETSKFEPTGLKVDEFGRHIREGATDSDSDESRSRRTRRMKKRDRSRSRSRSRSPVDRRSRRRRSPRRRKDKRSQSRSWSPRRRRSRSRSPILRRSGDIHNENVRRDKDKAQCFDFSRRKCYRGALCRFSHHESDRNATSRRSRNKHDLEPYSREKSSRINEGVKSISSKVSDHEYDGVTIQDIDRHQNITGQEVVQKMEDSEGQAVVSTTFGQSVNCNPSSEGVREVSPKVQENLVVIEKPETSIHNNDSSQNTVNSHQQHLVDDFQPEALSSADAAKDFIPSEGGSFVQQLHSNVSVDVKEHSGGASKDIIRSEDDSSVQKLQSNVSAEVPEHSGYPSQLLNAACVNDLSSDKRSMISANEVSGSEPLPCTSSSTQLQPVTSAVGPSEQPSLHSQASKELPPQSVSSVEFPLHTYPLPAFVGSHSQGENAVHIPQIPRQYGVMQQNALFPFQSTARENFEPYPAPLQTPNSHFSGPPHSSWTSLPPPPPPPSHTVYNTSSNMGVAKSFISSEFNQNQLHSRTDYVSQNSMIPGLPTHSQSSKFEDQVYPPMQDHSRTFMRTEPFSPKHLHQGNPAYQSLSSSTSFGGLHHQPKQFSWESDVNRPQPPLGGRLPPEGHFSTSSLTRPLSQQHQSAHNFQYTSSDVNLAGPGGTATVSRYPPDVPDSNHSTSLPGFGASRASAHYNPYASTFEQPLSSKLSSNFLQDNDMIYGNNYGPSRYREGDGVGSRETASPKPAGAVGQILPGPGEQYDPIFDSIEPSSSLKKFDFEQKQEVTGESNISLRPKSSQMSLDAKEKKHGKVGAVASTSSLNNDEYGETADAEVGAVENESLSNDMDDANLSPGEDEINQIKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQEKITQYIDSSQRKLTKLVMGYVDKYVKV 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1295 1397 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 522 542 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1413 1444 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 940 985 - -
Trre11g02296 1527 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 298 1526 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 711 740 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 617 669 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 69 129 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1161 1182 - -
Trre11g02296 1527 ProSiteProfiles Zinc finger C3H1-type profile. 686 713 IPR000571 GO:0046872
Trre11g02296 1527 MobiDBLite consensus disorder prediction 432 497 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1161 1216 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1 18 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 207 228 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 19 62 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1040 1072 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 880 915 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1198 1216 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1354 1369 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 395 411 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1045 1060 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 711 743 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 522 682 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 362 380 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 254 300 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 362 419 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 1 238 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 572 616 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 898 913 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 883 897 - -
Trre11g02296 1527 MobiDBLite consensus disorder prediction 184 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02296 Trre-Chr11 27379240 27386514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02296 - - cam:101503336 1940.24