Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02078 ATGAGAAGAGCTTCCTCTGTTTTACTCTTCAGAACCCTCGCCGCCGCACGTGCCGGCTCCGCCACCTCCATCGCCGTTCCTAACCGTTTTATCCAGGCCACTCTTTACGGCACCACAGCTGGTTCATCCCCATCTCCCCGGCGTTGGTTCTCTTCCATCCTCGCTGTTGCCGCCGGGACATCTCTCGGTGTTGGCGGTGCTCTGATTGTCTCTCACGAAGCACTCGCTAAGGAACCTCCTCCGTCACATGTTCTCCCTAACGACGTCGTTCTTTATCAATATGAAGCTTGTCCTTTCTGCAATAAAGTGAAAGCGTTTTTGGACTACTATGACATACCATACAAGGTTGTGGAGGTTAACCCTCTTAGCAAGAAAGAAATCAAATGGTCCGAGTATAAGAAGGTGCCAATAGTAATGGTAGATGGCGAGCAGCTAAATGACTCATCAGCTATCATCGACATGCTCGGAGAAAGGATTCTGTCAAAGAAAAAGGCAGATTCAACCTCTGAGGAAGACGAAGAGACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTACATGTTCTGTCACCTAATATATATAGAAATACCTCTGAAGCTCTCGAGTCTTTTGACTATATCACGAGCAATGGCAATTTTAGTTTCATGGAAAAAATTTCGGTGAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCCAAGAAGCTAAAGAAGAAATATAACATTACTGATGAGCGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGCGAGTTCCTTGGAGGGTCTAAGCCTAACTTTGCCGATCTGGCTGTCTTTGGGGTTCTAAGGCCCATACGCTATTTGAGGTCCGGTAAGGATATGGTTGAGCACACACGTATTGGTGAGTGGTACACAAGAATGGAGAGCGTTGTGGGAGAGCCTTCAAGAATTAAAGCCTAA 960 0.4688 MRRASSVLLFRTLAAARAGSATSIAVPNRFIQATLYGTTAGSSPSPRRWFSSILAVAAGTSLGVGGALIVSHEALAKEPPPSHVLPNDVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYKKVPIVMVDGEQLNDSSAIIDMLGERILSKKKADSTSEEDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFDYITSNGNFSFMEKISVKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALNGREFLGGSKPNFADLAVFGVLRPIRYLRSGKDMVEHTRIGEWYTRMESVVGEPSRIKA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02078 319 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 163 IPR004045 -
Trre11g02078 319 Gene3D - 167 317 - -
Trre11g02078 319 SUPERFAMILY Thioredoxin-like 88 182 IPR036249 -
Trre11g02078 319 SFLD Prostaglandin E synthase like.1 70 318 IPR034334 GO:0050220
Trre11g02078 319 ProSitePatterns Glutaredoxin active site. 91 107 IPR011767 -
Trre11g02078 319 ProSiteProfiles Glutaredoxin domain profile. 77 176 - -
Trre11g02078 319 SUPERFAMILY GST C-terminal domain-like 161 311 IPR036282 -
Trre11g02078 319 CDD GST_N_mPGES2 88 159 - -
Trre11g02078 319 Gene3D Glutaredoxin 83 162 - -
Trre11g02078 319 SFLD Prostaglandin E synthase like 70 318 - -
Trre11g02078 319 CDD GST_C_mPGES2 170 313 IPR034335 -
Trre11g02078 319 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 5 318 - -
Trre11g02078 319 Pfam Glutathione S-transferase, N-terminal domain 91 158 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02078 Trre-Chr11 23507003 23513498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02078 K05309 - gmx:100811576 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02078 11 23507003 23513498 Trre11g02078 11 23507003 23513498 ECH