Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01808 ATGAGGCCAGTGTTGGCGGTGAAAGCTATAATCGTCGTTGTTTTCACTTCGACTCTCATCCGTTGCGTTTCTGGTGCTAACCTCACTGTTGGCGGTGCTTCCGGCTGGGATCTCAATTCCAATATGCAGGACTGGTCTTCCACTACCACCTTCAATGTCGGTGACGATCTCGTATTCTCCTACACGCCGTTATACGATGTGGTGGAAGTGAACAAACAAGGTTACGACACGTGTACAATAGCAAACGCCATAGCCACACATAACAGCGGCGAAACAGTGATTCATCTCACCGATAACGGAACCCGTTACTTCGTCTGTGGGAGAATGGGCCATTGCAAACAAGGCCTCAAACTTGAAGTCCAAATTCAGGCCCAATCCATCAACAACGGAACTAATGATAATGAAAACCAACCCAGCGACGGTGGGCAAAAACCATCTCCTCCGCCGCGTAATCCTCCACCAGTACCACCAAGTCATCATTCTCCTCCTACTCCTCTAGATGCACCTTATGAAAAGATTTCCGGTGCAGAACCATTGATTACACTTTTAATCATCTTAGTTTTCAATTCGTTTTCTCTCTACTTTACCTTGGACCATCTCTTGCTTGATCCCCTTCTTCTTTTTTTTGAGAACCCTCTTGGTTTATACCTGATGCTTTCAGCTGTGTATGTTTTTTGTATTTAG 684 0.4561 MRPVLAVKAIIVVVFTSTLIRCVSGANLTVGGASGWDLNSNMQDWSSTTTFNVGDDLVFSYTPLYDVVEVNKQGYDTCTIANAIATHNSGETVIHLTDNGTRYFVCGRMGHCKQGLKLEVQIQAQSINNGTNDNENQPSDGGQKPSPPPRNPPPVPPSHHSPPTPLDAPYEKISGAEPLITLLIILVFNSFSLYFTLDHLLLDPLLLFFENPLGLYLMLSAVYVFCI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01808 227 PANTHER BLUE COPPER PROTEIN 27 123 IPR039391 GO:0009055
Trre11g01808 227 CDD Phytocyanin 26 122 - -
Trre11g01808 227 MobiDBLite consensus disorder prediction 142 164 - -
Trre11g01808 227 SUPERFAMILY Cupredoxins 26 122 IPR008972 -
Trre11g01808 227 Pfam Plastocyanin-like domain 36 115 IPR003245 GO:0009055
Trre11g01808 227 Gene3D - 25 128 IPR008972 -
Trre11g01808 227 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
Trre11g01808 227 MobiDBLite consensus disorder prediction 128 168 - -
Trre11g01808 227 FunFam Blue copper 24 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01808 Trre-Chr11 17634139 17635262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01808 10 155 Miscellaneous Gene Families AT2G32300 39.355 1.72e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01808 - - tpra:123910146 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01808 11 17634139 17635262 Trre11g01808 11 17634139 17635262 ECH