Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01801 ATGGCAGTAGTCACCTCAACACCAACCTCACCACCATCAATGGCACAAGATCTACTCAATTCCCTTCCCAAAACCCTAAAACTCAAAACAAAACAACAAGAGCTTCTAATTCGTGTCACAACTCTCGGTTTAATCTACATCCTCGCATTCATCACTCGTCTCTTCAGTGTTCTTCGTTACGAATCCATGATCCATGAATTCGATCCATATTTCAACTACCGCACAACTCTTTACCTCACAGAACACGGTTTCTCCGAGTTTTGGAACTGGTTTGACTCAGATTCATGGTATCCACTCGGTAGAATCATCGGCGGTACACTTTATCCCGGTCTTATGCTCACCGCCGCCGCGTTATACAAAATCCTCCATTTCCTCCGATTCGCCGTTCACATCCGTGAAGTCTGTGTTCTAACCGCGCCATTTTTCGCTTCGAATACCGCTATTGTCGCTTACTTCTTCGGTAAAGAAGTTTGGGATTCCGGTGCGGGAATTGTTGCTGCGGCGTTGATTGCGATTTGTCCTGGTTACATTTCTAGATCGGTTGCTGGATCTTATGATAATGAAGGAGTTGCGATTTTTGCATTGTTGTTAACTTTTTATCTGTTTGTGAAAGCTGTTAATACTGGATCGTTATCGTGGTCTTTGGCATCGGCTTTTGGTTATTTCTATATGGTTTCAGCTTGGGGTGGTTATGTGTTTATTATCAATTTGGTGCCACTTTATGTGTTGGTGCTGTTGATTAGGTTTGTTGGGTTTCAACATGTTCAATCTGGAGAACATATGGCTGCTATGGGTGTATTTTTCTTGCTTCAGGTGTTTTTCTTTTTGGACTGGGTAAAGCATTTGCTTGGAGATGTAAAATTGTTTCAAGCATTTTTGAGGATCACTGTAACTGGTGCAGTTAGTGTTGGTGCCATTGCCTTGGGAGTAGGCATGGCATCTGGTTACATATCACCATGGACCGGAAGGTTTTATTCCTTGCTCGATCCAACATATGCTAAGGATCATATTCCAATTATTGCTTCCGTCTCTGAGCATCAGCCTACTGCTTGGTCATCATTCATGTTTGATTTCCATATATTGCTCTTCCTTTTCCCTGCCGGGCTCTATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTCATAGTTATGTATGGTCTTACTAGCATGTACTTTGCTGGTGTTATGGTTCGATTGATTCTTGTTGCTACGCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGTCTCGGGTTGTGAGGGCAAAAGTCCAAACCTTACAAAGTGGTTCTGGTAAAGGAAGTAGTGCTTCAAAAGGTTCTTCTAAGGGTGTAATTGATAACTCCCAGCCTTTCCAAAAGAACGGTGCTATGATTTTACTTCTCGGTGCCTTTTATCTGCTTAGCAGATATGCTATTCACTGTACATGGGTTACATCTGAGGCATACTCGTCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCACGGCCAGAGGGTCATCTTTGACGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACTCCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCGTATGAGGATGAGGCTTATGACATAATGAGATCGCTTGATGTTGACTATGTTTTAGTCGTGTTTGGAGGTGTTACCGGTTATTCCTCTGATGACATTAATAAATTTCTATGGATGGTGAGAATTGGTGGCGGAGTTTTTCCTGTAATAAAGGAACCTGATTACCTCGTCAATGGAGAGTATCGTGTAGATAAAGGTGCAGCTCCAAAGATGTTGAACTGTCTCATGTACAAGCTGTCTTATTATCGGTTTGGAGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAAGACATAAAACTGGAGTACTTGGAGGAGGCGTTTACTACCCAGAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTAA 2118 0.4282 MAVVTSTPTSPPSMAQDLLNSLPKTLKLKTKQQELLIRVTTLGLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTEHGFSEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLSWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKHLLGDVKLFQAFLRITVTGAVSVGAIALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLSRVVRAKVQTLQSGSGKGSSASKGSSKGVIDNSQPFQKNGAMILLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01801 705 Gene3D - 508 658 - -
Trre11g01801 705 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 507 659 - -
Trre11g01801 705 Pfam Oligosaccharyl transferase STT3 subunit 41 247 IPR003674 GO:0004576|GO:0006486|GO:0016020
Trre11g01801 705 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 246 704 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01801 Trre-Chr11 17553969 17559004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01801 6 704 Miscellaneous Gene Families AT1G34130 81.781 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01801 K07151 - gmx:100780916 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01801 11 17553969 17559004 Trre11g01801 11 17553969 17559004 ECH