Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01791 ATGGCACTGGCTAATGCTGCAGTGACCGTTCCTTCTCTCTATGGCGTTTCTCGCATCACAAAGGTTCCATTTCTAGGTTCAAATGGCGAAATTAGTTCTGGATTTTGTGGTTCTGCTTTTTGCGTTGGGTCCCATTCGGGGAAAAGTGATGTTGTTCTTGAAAGAAGAAAGTTGAAATCTGTTAATAATAATAGTAACCGCATTGTTGAAAATGTGCAGTTTAAATCCACTGTTGAAATCCCAGTTTCTTGTTATCAGCTTATTGGCGTTCCTGATCGTGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAATGCAGAAATTGATGAAGGTTACACAGCGGGCGTTGTTGCATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAACTCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCGGGTGCTCTATGCCTTCTTCAAGAGATTGGAGAATCAAAATTTGTACTGGACATTGGAAGAGCAAGTCTTCAGCATCAAGATGCGAAGCCATATGCAGATGATTTAGTTCTTTCTATGGCACTAGCTGAGTGTACAGTTGCGAAGATTGGCTTTGAGAAGAAGAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCTCAATGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTTCTATCTCAGATCGAAGAATCTCTTGAAGAACTTGCACCCGCTTGCACCTTGGAGCTACTGAGCATGCCAAATACACCTGAAAATGTTGAGCGAAGACGAGGAGCAATTGCGGCTTTACGCGAATTACTTAGACAGGGTCTTGATGTTGAAGCTTCATGTCAAGTGCAGGACTGGCATTCTTTTCTAAGCCAAGCGTTTGGCAATTTACTGGCTAATGAGATAGTTGATCTTCTTCCTTGGGATAGTTTAGCCGTCATGCGGAAGAATAAGAAGACCATTGAATCACAAAATCTAAGGGTAGTAATTGATTCAACCTGTTTCTATAGGGTTTTTACAGCTCATATGGCACTTGGATTTTCCAGCAAGCAAAAAGAGTTGATTAACAAGGCAAAAATCATAATTGAATGTTTGATAACTTCAGAGGGCATTGATCTGAAATTTGAAGAAGCTTTTTGCCTATTCCTTCTTGGACTGGGCACAGAGGCTGAGGCAGTTGAAAAGCTGAAGCAGCTTGAGCTAAACTCAAATCCAAAACATAGTTCAATCTTGGGGAAGGCAATAATGGATGCTTCAGCTGCAAACCCATCATTGGAATTGTGGCTTAAGGATTCTGTGCTTGACTTATATCCAGATACTAAAGGTTGTTCTCCTGCTTTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAACTCTAAAGGATCTTCACACATGTTTCCTACTATATGTCATAGACCTCTATCATCATCGGGTTCTGTAGAACGGAAAGATTTTGAGGAACCTCGCTCATATATGAGCTCTTCCCCAAATTTGGGGTTCGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGGGTTCACTGCTATCCGGCAAAAATGAAAACGAACGCAATCCTAGTGAGCCACCTGTTAAAGTGAACAGGAACCTTGGCACACATCACAATGGTATTTGGAATAATCACTTTACTCGTGCTCAAGTATTTGAAAGAATAACACACGTTACCATTTTGGGTTGTATTGCATTTGCTTCAATTAAGTTGTTGGGAATGAACCTGGGCAAGAATTTTACTGGTTCTAACTGGGCTTCTACAAAAGCCCACAATAGCACTTCTTGGACTGCAAATTCATCTGTTAACTACAGTGTAGGTCCTACATATATGAGGCAAAGTTCTATTGCCAACAAACTGAAGAGAATTATGTCAACGGTTAAGTTACAGTTTTTGCCTCAGTCAGATGCTGGAAGTCGTAGTGATTTACACAGTGCTCTTACCTCATCATCTTCCCCTATTAACGTGTATAGGAGGTTGATGCCCGTGGAAGAAGCAGAAACCCTTGTTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTTAATGGCCTAGCTCAAGTCCTTGACGAATCTATGCTTGCTCAGTGGCAAGCCTTGGCTGATGCTGCAAAAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTAAAATTATCTGTCCTTAGAGCAGACATTCTATCAGATGGAAATGGATCAGACATAGCAGAAATAGAAGCCCTTTTAGAAGAAGCAGCTGAACTTGTTGACAGTTCTCAGCAAAAGAACCCAAACTACTATAGCACCTACAAAGTTCAGTATGTTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGCTGATATTCAAACATGA 2436 0.4113 MALANAAVTVPSLYGVSRITKVPFLGSNGEISSGFCGSAFCVGSHSGKSDVVLERRKLKSVNNNSNRIVENVQFKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTAGVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEIGESKFVLDIGRASLQHQDAKPYADDLVLSMALAECTVAKIGFEKKKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMPNTPENVERRRGAIAALRELLRQGLDVEASCQVQDWHSFLSQAFGNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVVIDSTCFYRVFTAHMALGFSSKQKELINKAKIIIECLITSEGIDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPKHSSILGKAIMDASAANPSLELWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNSKGSSHMFPTICHRPLSSSGSVERKDFEEPRSYMSSSPNLGFAVKQLTPTDLQGSLLSGKNENERNPSEPPVKVNRNLGTHHNGIWNNHFTRAQVFERITHVTILGCIAFASIKLLGMNLGKNFTGSNWASTKAHNSTSWTANSSVNYSVGPTYMRQSSIANKLKRIMSTVKLQFLPQSDAGSRSDLHSALTSSSSPINVYRRLMPVEEAETLVREWQTIKAEALGPSHEVNGLAQVLDESMLAQWQALADAAKEKSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVDSSQQKNPNYYSTYKVQYVVKRQDDGSWKFCEADIQT 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01791 811 MobiDBLite consensus disorder prediction 530 547 - -
Trre11g01791 811 Pfam ARC6-like, IMS domain 687 804 IPR025344 -
Trre11g01791 811 MobiDBLite consensus disorder prediction 530 549 - -
Trre11g01791 811 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 31 810 IPR044685 -
Trre11g01791 811 Coils Coil 760 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01791 Trre-Chr11 17469127 17475195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01791 - - gmx:100818147 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01791 11 17469127 17475195 Trre11g01791 11 17469127 17475195 ECH