Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01783 ATGCGTTGTCGCCCTCAAACAAAAGGTAATGATAGTCCAAAAGTTTCAGAAGCGGGAAAGAATTGCAAATCAACGACATATCAGCAAAAAAACAAAGTTACATCTTTGGACGTCGCAAAACATTCTCAAGGATCTTCTGTTTCAAGTATCAACTCTGATAGTAGGTGTGCCATTCTTACGTTCATTAGTTGTGAGCCTGATGGAACCTGGAAAATTTACGCTGTTCCAGTGCAGTTTCTCAATCACGTTAACCTAGCTTCTGGCAGCACCAATATGGATGGTTTGCAACTTCTTCTCCCTCCACCTCTTAACAGGCCAAAGATTGATCAATGTAAGGCGCCTAGAGGACATGTGCCTCCGAGTGCTTATTCGGCCAAATCATATGAAAGAAGTTTTACTGGTTCAAATGTTCGTCGTAGATGTCAAAACAAGGTAGCTAACAAAGCTTGTAAACTGAACGAACTTCCTGCGAATTCGTGTGCACAAAGTTCGGTGGTTAATAGTAGCCCTAGCTTGTCCCCTGATAGTTCTGCCACTGCTATTTTGTCTGAAGAGTGCTCGAATAACACCAAGGAAGATAAGTCTCTGAAGAAAAGCTCGAGAAAAAGGGAAAGAAAGAAAGTTAGTCAGATTAAGAAGCAATCAATTGACAGGGTATCTAATGATAGAGAAGTTCGTACCGAGGAATATGGCCGTGTAAGTTTGACTTCTGAAACCTCCAGCAGCAATGATGTGGATACAACTTCACCAGAATTTTCATCTTCCGACGACAGGTTAATGAAAATTGATTGTGTGAGGAACAAAATCAATGTTATAGATGAGGCAGTGATGTCAAAAGTGACTTCAGCTATTGTTCAGAATTCTTGCGGAGAATGTGCTACTTTTGAATCAAGAAATCGGCTGCATGATAGGAGTCCTGGTTGTACAGTCGCCAATACAGAAACGCTATGTTGTTTAAATGATACACAAGACTCGTTGGTGTTGGATTCAGTTTCGGTTGCTTCAAAAAGTGACGAAAGTACCAGTGATGGTCATATAGGAAAACCATCCAACAAGGCAAGTTGCGGAATCGCTTCAAATTCAGGAGATGAGCATTTTCTCGGTCAAGGCTTAACAAACGGCTTTCACAATAACTATCAACATAATGAGGAAATGAGGAACGATTGTAAAAATTGTGTTGTCAGTGATAAGAGAGTTCAGCAAAATAGAACAATGTCCAAGAGTTCTAGTTTCAATAAGTTTGCAGGTGTTGGTCGAACAGCGAAGGAAAACAGTCATTCTGTATGGCAAAAGGTTCAGAAGAATAGTTCGAGTGAATGTGGCAGTAGTGATTTGAAGAAAATAAACACATCTTCGTCACAAATCGTTTCTGTTACTGAAAAGGATACTTCAGCTATCAGAAATGGTAATTCTGTTGGCGCAAATGTCGTTTCAGGACCTGAGGATAAAAAACATGCGAAAAATAAAGCCAGTCGAAAATCAAAAGGTAAATCGGACTCGATTCCAAAGAAAGGACCCTGCGGTTATTCTAGGAAGGTTTCAAATCTTAATAGGACTGTGTTAAATGATAACATGAAGACTAGTATTCAACAGAATGATTCTTCAAATATCTCATCTCAGGAAATGAATCAACAAGGATCGGTAATGGAGTTTCAGACCGATGGAGTTGAACAACTAACATCTGAAATAGTTAATAGTGAACAATTTCATCCGGAAGAGTCCGAAATCCAGAAAGGTTCACAGGAAACGAAGAATGAAAGTATAGACATTCAATCTCAAATTTCTTGTTCTGATGATCATTCTCAAGTTTCTTGTAATCTTTTAGATAATCAAGTTGGTCAAACAATGAAAGAAGTTTCTTCTGCAGATTGCAATGCACAAAACCACAGTTCTGGATCTACAACCCTATGGAAATGGATACCGGTTGGGAAAAAAGATACCGGAACGGCAGAATATTCTGTTGAACCAACTAGTAATTTCGACTTGGAAAATGGTCTTGAACTTAAAATGGATTCCTTTTCTCAAAATCAGGATTCTTCGACAGATGCAAGAACTACGGGCATGGATCAGATTGAGAGTGAGGATCATAAACCAGTTGAGGAGGTTGCAGGTACATTTACAGAGAACAGGGACAAGCATGAAGTAACTAATCCCATGGTTTATGAATGTGAGAATAAATATACATTTGAAAATGATTCAACTAGAATTTCTCAAGCCGTGACAGACGTCTGCAGAATTCAATTTGCCTGTGAAGTAGTACACAAGGCGACTGGTGGCCCGATTGCGGAGTTTGAAAGACTACTTCATTGCTGTAGTCCTGTTATTTGTCGATCATCCAATTCACTCGGTTGTTTGACCTGTGCACAAAACCATTCCATTGATGTCTCACTGTGCAGGCACGAGATACCTGAAGTATCTTTGGGATGTCTGTGGGAGTGGTATGAGAAACACGGGAGCTATGGATTAGAGATAAGGGCTTTTGATTATGAAAATCCGAAGACATTTGGTGGTGTTGGTCATTTTCCATTTCGTGCCTACTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTCAAGAACCATGAAAATCGATGTGTTAGCAACAATGAGAGATTTTCTAACTGTGAGGCTTCAAATAGCGAAATGTTTGACTATTCAGAAGACTCGTTAGCGGCTCGTATCAATAATGCATCCAATCCATCTACTGATACAACTGGCTCTAGTGATTTAGAACTTCTTTTTGAATATTTTGAATGCGAACAACCTCAACAAAGACGACCATTATATGAAAGGATACAGGAGCTGGTTAGAGGTGAGGTACCAATCCAGTCAAAAACTTATGGTGACTCAACTAAACTGAATTCGATAAACCTGCGAGATCTTCATCCTACGTCTTGGTACTCGGTTGCATGGTATCCTATTTACCGTATACCAGATGGAAACTTTCGCGCATCTTTTCTAACTTACCATTCACTTGGACATTTGGTTCGTAGAAGTTCAAATTCTGATTCGCCAATTTTAGATTCTTGTGTAGTTTCTCCAGCTGTAGGGCTTCAAAGTTACAATGCACAGGGTGAATGCTGGTTCCAGCTGAGTCATTCTGCGCTGACAGCCGAAATGATAGGCATAGACGCATCAATATTTCTTAAAGAGCGTTTGAGGACACTTGAAGAAACAGCATCTCTTATGTCTAGAGCTGTTGTCAACAAGGGGAATCAAATCTGCACAAACAGACATCCGGATTATGAATTTTTCTTGTCGAGGCGACGGTATTGA 3273 0.399 MRCRPQTKGNDSPKVSEAGKNCKSTTYQQKNKVTSLDVAKHSQGSSVSSINSDSRCAILTFISCEPDGTWKIYAVPVQFLNHVNLASGSTNMDGLQLLLPPPLNRPKIDQCKAPRGHVPPSAYSAKSYERSFTGSNVRRRCQNKVANKACKLNELPANSCAQSSVVNSSPSLSPDSSATAILSEECSNNTKEDKSLKKSSRKRERKKVSQIKKQSIDRVSNDREVRTEEYGRVSLTSETSSSNDVDTTSPEFSSSDDRLMKIDCVRNKINVIDEAVMSKVTSAIVQNSCGECATFESRNRLHDRSPGCTVANTETLCCLNDTQDSLVLDSVSVASKSDESTSDGHIGKPSNKASCGIASNSGDEHFLGQGLTNGFHNNYQHNEEMRNDCKNCVVSDKRVQQNRTMSKSSSFNKFAGVGRTAKENSHSVWQKVQKNSSSECGSSDLKKINTSSSQIVSVTEKDTSAIRNGNSVGANVVSGPEDKKHAKNKASRKSKGKSDSIPKKGPCGYSRKVSNLNRTVLNDNMKTSIQQNDSSNISSQEMNQQGSVMEFQTDGVEQLTSEIVNSEQFHPEESEIQKGSQETKNESIDIQSQISCSDDHSQVSCNLLDNQVGQTMKEVSSADCNAQNHSSGSTTLWKWIPVGKKDTGTAEYSVEPTSNFDLENGLELKMDSFSQNQDSSTDARTTGMDQIESEDHKPVEEVAGTFTENRDKHEVTNPMVYECENKYTFENDSTRISQAVTDVCRIQFACEVVHKATGGPIAEFERLLHCCSPVICRSSNSLGCLTCAQNHSIDVSLCRHEIPEVSLGCLWEWYEKHGSYGLEIRAFDYENPKTFGGVGHFPFRAYFVPSLSAVQLFKNHENRCVSNNERFSNCEASNSEMFDYSEDSLAARINNASNPSTDTTGSSDLELLFEYFECEQPQQRRPLYERIQELVRGEVPIQSKTYGDSTKLNSINLRDLHPTSWYSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRSSNSDSPILDSCVVSPAVGLQSYNAQGECWFQLSHSALTAEMIGIDASIFLKERLRTLEETASLMSRAVVNKGNQICTNRHPDYEFFLSRRRY 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01783 1090 MobiDBLite consensus disorder prediction 567 595 - -
Trre11g01783 1090 Pfam Protein of unknown function (DUF789) 762 1084 IPR008507 -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 673 687 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 9 23 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 210 231 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 568 582 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 232 255 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 480 500 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 186 255 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 423 475 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 400 415 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 673 695 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 1 23 - -
Trre11g01783 1090 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 22 1089 - -
Trre11g01783 1090 MobiDBLite consensus disorder prediction 400 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01783 Trre-Chr11 17383656 17388940 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01783 - - psat:127132538 1464.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01783 11 17383656 17388940 Trre11g01783 11 17383656 17388940 ECH