Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01609 ATGGCGTTGAAGTTGAAGGATACATTTTACATATCACATGGATCACCAACGTTGTCAATAGATGAATCTATTGAAGCAAGAAAGTTTCTACAATCATGGAAGAAAGATGTGTATCAAGAGAAACCTAAATCTATTTTGGTTATTTCTGGTCATTGGGACACAACCGTACCAACTGTTAACGTCATTCAAACAACCAATGATATAATCTATGATTTCTATGGTTTACCCAAACCCATATATGAAGATGTAAATCATTATGAACAAAAGGCACCACATGCAAGAAAGGCTCATCCACATCCAGATCATTTTTTTCCATTGCATGTTGCTATTGGTGCTGCTGGTGAAAATTCAAAGGCAAAACTTATCCATAGTAGTATTGATGTGGGCACTCTATCTTATGCCTCTTACCAGTTTACATCAGATTCAAGCTAA 432 0.3588 MALKLKDTFYISHGSPTLSIDESIEARKFLQSWKKDVYQEKPKSILVISGHWDTTVPTVNVIQTTNDIIYDFYGLPKPIYEDVNHYEQKAPHARKAHPHPDHFFPLHVAIGAAGENSKAKLIHSSIDVGTLSYASYQFTSDSS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01609 143 SUPERFAMILY LigB-like 8 81 - -
Trre11g01609 143 PANTHER UNCHARACTERIZED 1 81 - -
Trre11g01609 143 Gene3D - 85 139 - -
Trre11g01609 143 Gene3D - 2 84 - -
Trre11g01609 143 SUPERFAMILY LigB-like 82 138 - -
Trre11g01609 143 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 75 IPR004183 GO:0006725|GO:0008198|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01609 Trre-Chr11 15712234 15715032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01609 K15777 - gmx:100798236 135.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01609 11 15712234 15715032 Trre11g01609 11 15712234 15715032 ECH