Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01601 ATGGTTATAGATATACAAAGCAAACTACGTGTAGCTCTTGGTACAATGAAAGATCAAGCTTCAATTGGCAAGGCCATGATGTATAACCATCAACAACATGATGGATTTTCCAACATAGAAATTGCAATCCTTCGTGCAACTAGTCATGCTAATAGCACAATTGATGACAAATACATGCATGAAATCCTTTTCCATGTATCAAACTCAAAAGGGTCAATCCCTTTTCTCGCCGAAAGGATTTCGCGCCGTCTATGCAAAACTAAAGACAATCTTGTTGCCTTTAAGACTCTTGTCTTAATTCATAGACTTCTTAGAGGTGGAAACAGATCATTTGAACAAGAATTATGCAAATCACATGTTTCTGGCCATTTACAAATTATTTTAAGGTATTGTGTTACAAAGAATTTTTCTGACCCTTTAGTTTGTTTCTTACACAAGTATTCATCTTATCTTGAAGAAAGAATGAGTTGGCTTATTAACCAAGGTGGAAAACTTGAACCAATTATGTCTAAAGGGTTAGAATTTAGAAGATATGATGAAAAATCATTTGATATGGCATTTAGAATATTACCTAAATGTCAAATTCTTATTGATAAGGTTTTGGAATGTTCACCATATGATATTTTGAGGTCAAATAATCATCATAGTCTTGCTCATGTTGCTATGAGTAATACTTTGAAAGAAAGTTTCCAAGTTTACATGATATTTTGTGAAGGCATTGAAGCTCTTGTCAATATGTTTTTTGATTTAGAATCTTCAGCTAGAGGCTTAGCTTGTGAAATACTCAAGAAAGGTTCTATTCAAAGTCAAAAGCTTCATGATTTATATCAAACATGCAAAAAATTGGTTGAAAATAAGAATTTGGAATACCCTTTTGTTCAAATTATTAATATGAATCATATAATGGCATTAGATCAATTTGCTTGTCAACAAAAACAAGTTGAAGCTTCACAAAGTATCTCAAAAAAGATAGAATTGGAAGTAACAAAAAAAGATGAAGAAAAAGTTGATTTAAATTTTTCAGCAACACCAACTCTTATGTCATGGACACTAGAGACTAAAATAAGCAAAGTTTGGGTGGTGTTTGAAGATGAAATTACTAATGAATCACAGATTCTTCCAACACAACAAAATCTTGGAAGTGTTAATTATGCAAGCATGTCCTCCAAAGTTTGA 1176 0.3189 MVIDIQSKLRVALGTMKDQASIGKAMMYNHQQHDGFSNIEIAILRATSHANSTIDDKYMHEILFHVSNSKGSIPFLAERISRRLCKTKDNLVAFKTLVLIHRLLRGGNRSFEQELCKSHVSGHLQIILRYCVTKNFSDPLVCFLHKYSSYLEERMSWLINQGGKLEPIMSKGLEFRRYDEKSFDMAFRILPKCQILIDKVLECSPYDILRSNNHHSLAHVAMSNTLKESFQVYMIFCEGIEALVNMFFDLESSARGLACEILKKGSIQSQKLHDLYQTCKKLVENKNLEYPFVQIINMNHIMALDQFACQQKQVEASQSISKKIELEVTKKDEEKVDLNFSATPTLMSWTLETKISKVWVVFEDEITNESQILPTQQNLGSVNYASMSSKV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01601 391 Gene3D - 7 158 IPR008942 -
Trre11g01601 391 SMART enth_2 37 182 IPR013809 -
Trre11g01601 391 SUPERFAMILY GAT-like domain 177 307 - -
Trre11g01601 391 Gene3D ANTH domain 172 327 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Trre11g01601 391 PANTHER CLATHRIN ASSEMBLY PROTEIN 8 335 IPR045192 GO:0048268|GO:0072583
Trre11g01601 391 Pfam ANTH domain 39 307 IPR011417 GO:0005543
Trre11g01601 391 CDD ANTH_N_AP180_plant 39 157 - -
Trre11g01601 391 SUPERFAMILY ENTH/VHS domain 38 156 IPR008942 -
Trre11g01601 391 ProSiteProfiles ENTH domain profile. 31 165 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01601 Trre-Chr11 15642771 15643946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01601 - - tpra:123911526 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01601 11 15642771 15643946 Trre11g01601 11 15642771 15643946 ECH