Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01581 ATGCCAAAGGAAACTGCTATGTCAACAACCTATGAAGTATTTGGAGTCAAGATTGACAAAAATCCATCAAAATCCAAACTCAATCAACTTGGTGTCTCAACTTGGCCCAAGTGGGAAGGTGGTCCATTAACAATTCCATGGTCCTTTGAAGAAGAAGAAACAATGTATATACTTGAAGGAAAAGTGAAGGTTAGTGTTGAAGGTGCAGTTGGATCTTTTGAAATTGGAGGTGGTGATTTAGTTGTTTTCCCTAAAGGAATGAACATTACATGGGATGTAACTGAACCTGTGAAGAAACACTATAGCTTGAAAAAAGAATGA 321 0.3738 MPKETAMSTTYEVFGVKIDKNPSKSKLNQLGVSTWPKWEGGPLTIPWSFEEEETMYILEGKVKVSVEGAVGSFEIGGGDLVVFPKGMNITWDVTEPVKKHYSLKKE 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01581 106 CDD cupin_TM1112-like 34 103 - -
Trre11g01581 106 PANTHER OS04G0445200 PROTEIN 6 104 - -
Trre11g01581 106 Gene3D Jelly Rolls 4 103 IPR014710 -
Trre11g01581 106 Pfam EutQ-like cupin domain 28 101 IPR008579 -
Trre11g01581 106 SUPERFAMILY RmlC-like cupins 19 101 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01581 Trre-Chr11 15439206 15441542 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01581 K06995 - gmx:100807654 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01581 11 15439206 15441542 Trre11g01581 11 15439206 15441542 ECH