Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01560 ATGGGGAATACGTTCTGTTTATTCTGTGGTTGCGTTGAACAATCAAGCGTTGGTATTGTTGAACAGTGGGGTCGTTTTCACAGAGTTGCTCAACCTGGTTTTCAATTCTTTAATCCTTTCGTCGGTGAATGTCTTGCTGGTATTCTCTCCACTCGTATCTCCTCCCTTGATGTCAAAATCGAAACCAAAACTAAGGACAATGTGTTTGTGCAGTTGATATGTTCGATTCAATACCGTGTGGTTAAGGAGAATGCTGATGATGCTTTTTACGAGTTGCAAAACCCGCAGGAACAGATCCAGGCTTATGTTTTTGATGTGGCCCGTGCTATTGTTCCGAAGATGAATTTGGATGAGCTGTTTGAGCAAAAAGGTGAGGTTGCCAAAGGTGTCATGGAAGAACTTGGAAAGGTGATGGGAGAATATGGATATAGCATAGAACACATACTGATGGTTGACATTATACCCGATCCTTCTGTACGTAGGGCAATGAATGAGATCAATGCAGCTCAAAGGCTTCTACTTGCTAGTGAATTCAAAGGAGAAGCTGACAAGGTGCTAATAGTTAAAAAAGCTGAAGCAGAAGCCGAATCAAAGTATTTAGGCGGGGTTGGTGTGGCAAGACAGAGGCAAGCTATCACGGATGGATTGAGAGAGAATATCTTGCATTTCTCTAACAGGGTAGAAGGAACTTCAGCAAAGGAAGTGATGGATCTTATCATGATTACTCAGTACTTTGACACAATCAGAGACCTTGGAAACTCTTCAAAGAATACCACAGTTTTTATACCACATGGACCTGGCCATGTTAGGGATATCAGTAGTCAAATACGCGATGGAATGATGGCAGCATCGTGTGCTCAAGTTACTGATGTTGAGTGA 879 0.4232 MGNTFCLFCGCVEQSSVGIVEQWGRFHRVAQPGFQFFNPFVGECLAGILSTRISSLDVKIETKTKDNVFVQLICSIQYRVVKENADDAFYELQNPQEQIQAYVFDVARAIVPKMNLDELFEQKGEVAKGVMEELGKVMGEYGYSIEHILMVDIIPDPSVRRAMNEINAAQRLLLASEFKGEADKVLIVKKAEAEAESKYLGGVGVARQRQAITDGLRENILHFSNRVEGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFIPHGPGHVRDISSQIRDGMMAASCAQVTDVE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01560 292 SMART PHB_4 7 167 IPR001107 -
Trre11g01560 292 CDD SPFH_like_u4 11 280 - -
Trre11g01560 292 Gene3D Band 7 domain 38 169 IPR036013 -
Trre11g01560 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 286 - -
Trre11g01560 292 Pfam SPFH domain / Band 7 family 12 179 IPR001107 -
Trre11g01560 292 SUPERFAMILY Band 7/SPFH domain 39 171 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01560 Trre-Chr11 15244075 15247748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01560 - - gmx:100788194 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01560 11 15244075 15247748 Trre11g01560 11 15244075 15247748 ECH