Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01558 ATGTCCATAAACGAATCCCAAACTCATCACAACAATGTTGAAACCAAAACCACCTTCACAACACCATTATCTTCAAAAACTCACCCAATTTTGACCCTTCAATTAAAAGAACCACAAGACACAATTTTTCCTACAAATTCAAACACCCTTTTAACCAAAACAATGACTTCAACAAACTCTACTTCAACAGAACCGCTACCTTCTTCCGATGAAATCGCCATTAAAGCTGTTAATAAACGCTATGAAGGTCTTGTTACAGTTAGAACAAAAGCTATCAAAGGTAAAGGTGCTTGGTATTGGAATCATCTTGAACCAATTTTGGTTCGAAATCCTGATTCAGGTGTTCCTAAATCTGTTAAACTTAAGTGTTGTTTGTGTGATTCTGTTTTTTCTGCTTCAAATCCTTCAAGAACAGCTTCTGAACATTTAAAGCGTGGAACTTGTTCTAATTTTAACAATTCTGGGTTTAAAAATGAACCCGGTTCAGTTCCTTCTCCGGTTCCTATTTCGTCGGTTTCCGGTTCGAACCGGAAAAGAGGTTCACCTCATCAAATGGGTGTTTCTGTTTCAGTTTCAACTTCACCAACATCATTAACTTATCAAAATCATAACTTGGCATTGGTTGAAATTGGATACCCTCAGGTGCATGGTAATATGGTGAACCATCAGAACCAGAATCAGAACCAGAATCATCAGAATCTGAATCATCAGAATCATTTGATGTTATCTGGTGGAAAAGAAGATTTGTGTGCTTTGGCTATGTTTGAAGATAGTGTGAAGAAGTTGAAGAGTCCAAAAACATCACCTGGTGCTTCTTTGAGTAAAGAACAGGTTAATTCTGCTTTGGATTTACTTGCTGATTGGTTTTATGAATGTTGTGGTTCTGTTTCTTTGTCAACACTTGAGCATAGAAAGTTTCAAGCTTTTCTATCTCAAGTTGGTTTACCTGTAGGAAATGGTTTAAGACGCGAGGTTTCCGGTCCAAGGCTCGATGCTAGGTTTAGCGAGGTTAAGAGTGAATCCGAGGCAAAAATTAGGGATGCAATGTTTTTTCAGGTAGCTAGTGATGGTTGGAAGAGTTATAATAATAATATTATTAATATTAATAGTAATAGTAATAATAGGAATTTGAATAGTTTGTGTTGTGGCGGTGAGAGTTTGGTTAAGTTTATGGTGAATCTTCCAAATGGGAGTAGTGTTTTTCAAAAGGCGGTGTTTACGGGTGGGGGAGTTGTGAATTCGAAGTATGCAGAAGAGGTTTTTTGGGAGACTGTAACTGGTGTTAGTGGAAGTGTTGTTCAAAGATGTGTAGGGATTGTTGCTGATAAGTTTAAGGCTAAGGCATTGAGGAATTTGGAGATTCAAAACCACTGGATGGTAAATACTTCTTGCCAGCTTCAAGGGTTTCTTAGTTTAATTAAGGATTTTAATAAAGAGCTTGAACTTTTCGGTGTTGTTACTAAGAATTGTCTCAAAGTTGCGAATTTTATAGACACTGAGACACAGGTGAGGAATGTTTTTGTTAATTATAGAATGCAGGAGATGGAGTATGCTGGGTTGATTCGAGTCCCTCCGCCGAAATGTGATCCTTTGAAGAATTTTGCGTCTGTGTTTCCGATGCTTGAGGATATTTTGACCTGTGCTAGAGTAATTCAAATGGTTGTGATGGAAGAGGCGTTTAAGGTAATGTTTATGGAGGATCCGCATGCTAGAGAAGTGGCTGGTTTGGTTCAGAATGAGGTGTTTTGGAACGAGCTCGAAGCTGTTTATTCGCTTGTTAAGATTATTAAAGGAATGGTTCAAGATATTGAGGCGGAGAGGCCGCTGATCGGTCGGTGTTTGCCTCTTTGGGAGGAGCTAAGAACCAAAGTGAAAGAATGGTGTGGCAAATACAATGTTGCCGAAGGACCTGTGGAGAAAATAGTCGAAAAACGGTTTCGAAAAAACTACCACCCAGCATGGTCCGCGGCATTTATACTCGATCCACTTTACTTGATCAAAGACACAAGCGGAAAGTATCTTCCACCATACAAGTTTTTGACGCGCGAACAAGAGAAAGATGTTGATAAGTTACTTACACGGTTAGCTTCAAGAGAAGAAGCTCATGTCGTGTTGATGGAGCTAATGAAATGGCGATCAGAAGGGCTCGACCCTCTTTACGCACAAGCCGTTCAAATGAAACAAAGAGATCCCTTAACCGGTAAGATGAAAGTTGCAAATCCGCTTAGTAGTCGACTTGTTTGGGAAACATGTTTGTGTGAGTATAAATCTTTAGGGAAGATTGCGGTGAGGCTCATTTTTCTTCATGCAACTTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAAGAAAGTTTCTGGAAACAAAAACTCTCGAGTCGCTTTAGAAAGAGCTCAGAAAATGATATATATTGCAGCTCATGCAAAGCTTGAAAAGAGAAATTTTTCGAGTGAGGAAGAAAAAGATGCAGAATTGTTTGCCATTTCTGGAAGCGACGAAGATAGCATGCTAGCTGAAGTCTATGCTGATGCAATGCAATCTTAG 2544 0.3903 MSINESQTHHNNVETKTTFTTPLSSKTHPILTLQLKEPQDTIFPTNSNTLLTKTMTSTNSTSTEPLPSSDEIAIKAVNKRYEGLVTVRTKAIKGKGAWYWNHLEPILVRNPDSGVPKSVKLKCCLCDSVFSASNPSRTASEHLKRGTCSNFNNSGFKNEPGSVPSPVPISSVSGSNRKRGSPHQMGVSVSVSTSPTSLTYQNHNLALVEIGYPQVHGNMVNHQNQNQNQNHQNLNHQNHLMLSGGKEDLCALAMFEDSVKKLKSPKTSPGASLSKEQVNSALDLLADWFYECCGSVSLSTLEHRKFQAFLSQVGLPVGNGLRREVSGPRLDARFSEVKSESEAKIRDAMFFQVASDGWKSYNNNIININSNSNNRNLNSLCCGGESLVKFMVNLPNGSSVFQKAVFTGGGVVNSKYAEEVFWETVTGVSGSVVQRCVGIVADKFKAKALRNLEIQNHWMVNTSCQLQGFLSLIKDFNKELELFGVVTKNCLKVANFIDTETQVRNVFVNYRMQEMEYAGLIRVPPPKCDPLKNFASVFPMLEDILTCARVIQMVVMEEAFKVMFMEDPHAREVAGLVQNEVFWNELEAVYSLVKIIKGMVQDIEAERPLIGRCLPLWEELRTKVKEWCGKYNVAEGPVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPYKFLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPLTGKMKVANPLSSRLVWETCLCEYKSLGKIAVRLIFLHATSCGFKSNWSFMKKVSGNKNSRVALERAQKMIYIAAHAKLEKRNFSSEEEKDAELFAISGSDEDSMLAEVYADAMQS 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01558 847 MobiDBLite consensus disorder prediction 1 21 - -
Trre11g01558 847 SUPERFAMILY Ribonuclease H-like 435 809 IPR012337 -
Trre11g01558 847 PANTHER OSJNBA0013A04.12 PROTEIN 77 811 - -
Trre11g01558 847 MobiDBLite consensus disorder prediction 153 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01558 Trre-Chr11 15202908 15205451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01558 - - psat:127131004 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01558 11 15202908 15205451 Trre11g01558 11 15202908 15205451 ECH