Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01383 ATGAAATCGATATCGAGATCCACCGTCGTGTTGGTGTTTCCGTTGCTGTTAATCGTCGGCGCGTTGGTGTACACGCGGTTCCTTGAAACACCTGTAATAATTTCCTCAGCAGTAGCACGTTCATCTTCCGAACAAATCCTAACCACAAAAACAGCCCAAAATCAAACAGAGATTCCATTGGATTGCAATGGATACAACCACACAGGAAAATGTCCCAATCACCAAATCTCAATAAACAATCAAGACCATCCATCAAATTCCACGTGTCCAGATTACTTCCGTTGGATCCACGAAGATTTAAGACCATGGGCCCACAATGGAATAACAAAAGAAACAATAGAAAAAGCAAAACCAACAGCAAATTTCAAATTAATAATATTAAATGGAAAAGCTTATTTAGAAACATATGAAAAAGCATTTCAAACAAGAGATACTTTTACTCTATGGGGTATCCTACAAATGTTAAGGAAGTACCCTGGAATGTTACCTGATTTGGAGTTCATGTTTGATTGTGTTGATTGGCCAGTTGTATCAATTGGTCAATATAATGGACTTGATAGTGGTGTTGACCCTCCACCACTTTTTCGTTATTGTGGTAATGATGCAACTTTGGATATTGTTTTTCCTGATTGGTCCTTTTGGGGATGGCCTGAGGTTAATATAAAGCCATGGGAGATATTGTTGGGAGAGTTGAATGAGGGAAACAAGAGAATTGAATGGATGAAAAGAGAACCTTATGCTTATTGGAAAGGTAATCCAACTGTTGCTGAAACAAGACAAGACCTTATGAAATGTAATGTTTCTGAAAAAGAAGATTGGAATGCTCGTTTATATGCTCAGGATTGGGGACGAGAGTCGCAAGAAGGGTACAAGAAATCAGACTTGGCAGGCCAATGCACTCATAAATATAAGGTATACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATACATTCTAGCATGTGATTCTCCCACTTTACTTGTGAAACCTCATTACTATGATTTCTTCACAAGAGGGTTAATTCCAGTGCATCACTATTGGCCTATTAAGGAAGATGATAAGTGTAAGTCCATTAAGTTTGCTGTGGATTGGGGCAATAGTCACAAGGCAAAGGCACATAATATTGGAAAAGCAGCAAGTAATTTTATTCAAGAAGAGTTGAAGATGGATTATGTGTATGACTATATGTTTCATCTTCTAAATTCATATGGTAAACTCTTTAGATACAAACCCTCAATAAGTGATAAAGCTGTTGAACTATGTGTGGAATCAATGGTTTGTAAAGCAGAAGGAAGAGAAAAGAAATTTATGATGGAATCATTGGTAAAGGCTCCTTCAAACACCAATCCATGCACCATGCCTCCTCCTTTTGATCCTCCTTCTTTGCACGCGCACATAAAAAGAAAGCAAGGTTCAATTCAACGAGTCGAATTTTGGGAGAAAAGTTATTGGGAGAAACAAAATATGAAATCGTAA 1479 0.378 MKSISRSTVVLVFPLLLIVGALVYTRFLETPVIISSAVARSSSEQILTTKTAQNQTEIPLDCNGYNHTGKCPNHQISINNQDHPSNSTCPDYFRWIHEDLRPWAHNGITKETIEKAKPTANFKLIILNGKAYLETYEKAFQTRDTFTLWGILQMLRKYPGMLPDLEFMFDCVDWPVVSIGQYNGLDSGVDPPPLFRYCGNDATLDIVFPDWSFWGWPEVNIKPWEILLGELNEGNKRIEWMKREPYAYWKGNPTVAETRQDLMKCNVSEKEDWNARLYAQDWGRESQEGYKKSDLAGQCTHKYKVYIEGSAWSVSEKYILACDSPTLLVKPHYYDFFTRGLIPVHHYWPIKEDDKCKSIKFAVDWGNSHKAKAHNIGKAASNFIQEELKMDYVYDYMFHLLNSYGKLFRYKPSISDKAVELCVESMVCKAEGREKKFMMESLVKAPSNTNPCTMPPPFDPPSLHAHIKRKQGSIQRVEFWEKSYWEKQNMKS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01383 492 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 39 486 - -
Trre11g01383 492 SMART cap10 161 411 IPR006598 -
Trre11g01383 492 Pfam Glycosyl transferase family 90 85 481 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01383 Trre-Chr11 13535657 13544636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01383 - - gmx:100800365 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01383 11 13535657 13544636 Trre11g01383 11 13535657 13544636 ECH