Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01380 ATGGTTGAGGTTAGAGTTCCAAATCTTGATTGTGAAGGGTGTGCTTCAAAATTAAAGAAAGCTCTATTCAAGCTCAAAGGAGTAGATGATGTAGAAGTTGAAATGGAAGCACAAAAGATAACAATAAGAGGCTATGGTTTAGAAGAGAAAAAATTATTGAAAGCAATAAAACGTGCAGGAAAAGCAGCAGAGCCATGGCCATTTCTTCCAGGACATACACATTTTGCTTCATTTTACAAATATCCAAGTTACATTGTTAATCATTATTACAATGATGCATACAAAAGTGAAGCTACAAATGGAGTTCATACTTTTTTTCATACCCCTTCTGTTTATTCAGTTGCTGTTGCATCTGATGAAGCTTTTGCTTCAATGTTTAGTGATGATAATCCTCATGCTTGTACTATAATGTAA 414 0.3406 MVEVRVPNLDCEGCASKLKKALFKLKGVDDVEVEMEAQKITIRGYGLEEKKLLKAIKRAGKAAEPWPFLPGHTHFASFYKYPSYIVNHYYNDAYKSEATNGVHTFFHTPSVYSVAVASDEAFASMFSDDNPHACTIM 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01380 137 CDD HMA 3 64 IPR006121 GO:0046872
Trre11g01380 137 ProSiteProfiles Heavy-metal-associated domain profile. 1 64 IPR006121 GO:0046872
Trre11g01380 137 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 1 134 IPR045181 GO:0046872
Trre11g01380 137 SUPERFAMILY HMA, heavy metal-associated domain 2 67 IPR036163 GO:0046872
Trre11g01380 137 Pfam Heavy-metal-associated domain 4 61 IPR006121 GO:0046872
Trre11g01380 137 Gene3D - 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01380 Trre-Chr11 13492445 13494158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01380 - - aprc:113866662 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01380 11 13492445 13494158 Trre11g01380 11 13492445 13494158 ECH