Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01378 ATGGCTCAGAAAGTTGTGTTAAAGGTGTTAACTATGACTGATGACAAAACAAAGCAAAAAGCCATAGAAGCAGCTGCAGATATCTATGGGGTGGATTCAATTGTTGCAGATGTAAAGGAACAGAAATTGACTGTGATTGGTTCAATGGATACAGTGAAAATAGTGAAGAAATTGAAGAAAGTAGGAAAAGTAGATATTGTTTCTGTTGGTCCTGCAAAAGAAGAGAAGAAAGAAGAAAAGAAAGAAGAGAAAAAGGAAGAGAAAAAAGAAGAGAAAAAGGAAGAAAAGAAAGAGGAAAAGAAAGAGGAAAAGAAATAA 318 0.3396 MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIVADVKEQKLTVIGSMDTVKIVKKLKKVGKVDIVSVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01378 105 MobiDBLite consensus disorder prediction 71 105 - -
Trre11g01378 105 Gene3D - 1 75 - -
Trre11g01378 105 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 96 - -
Trre11g01378 105 SUPERFAMILY HMA, heavy metal-associated domain 2 63 IPR036163 GO:0046872
Trre11g01378 105 Coils Coil 72 105 - -
Trre11g01378 105 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01378 Trre-Chr11 13477687 13478420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01378 - - gmx:100802142 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01378 11 13477687 13478420 Trre11g01378 11 13477687 13478420 ECH