Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01375 ATGCGAACTCGCTTTCTCAACAACGACTACTTCACTCTCCCATCATCCCAACGTCACGAAACCATCCCTTTCCTCCACCTCCCTGTCCCGCGCCTCTCTACTCCGCCTTCCTCCGCCGTCAACCACCACCTCCACCTCCTCTACTCTCCTTTCCCCGACGTTTCCCTCCACATCGATCCCTTCCCTATCCAATCCGCACTCTCCTCTTTCCTCTCCTCCGTTCTCCCTCACAAAATCCACCTCCAATCACACGATCTCGAAGTTCCAAATCCAGATCGCACTTCCTCCGTTGCCGATTATCATAATCGCGGCGAGCGAGAAGCTGATTTTATCTTCGAAGATTATATCTCCGATGCTGATATTGAATTTTCCAAAGAGAGTAAAACGGTTACTCGTAGTGATGAGAATGAAGTCGATTATGAACCGATTCAATTCGAAACACCTGAGCAACTGGATGCACTCTTGGAAAATGTATGCTTCACCGAGAAGGAGCGGATGCAAATGCTGTCTCAGACTCCAAAGGTTGAAAATAGCATGGAAATGCTCATGCCCGAGTCATTAATGCAGTACCCTTACGAGGATCTGGAATCAGTATCAAGGGTTGAGGATGTGATTTCTGAGTACCTGAAGGGGGATAATGCATACACTTTAGAAGGTAATATTTCTGTTCAGCCCCTGCCACACTCTGACAAAAAGACATTTCTAATTTTGGAAGTGGATGAGGAAAGTTTGGGAATTCCCACAAGCTTATCTATGGTAGATATTATTGAATCATATTTTGGAGATCTCAAACCTCAAATTTTTGATGAACGATACCAGTCCATAACAGCGGGAAATGAACTATTGGATTCAAAAGTGCATGACATGGTGAAGTTGTTCTCAGAAGACTGTGTATCAAAGAAGAGTTTGGTGTTATCCGATCTATTTCCTGAAAGAGATTTCATAAATATGTTGGAAAATGAACATGTGGGTGGGAATGTTGCTCTGGATGGGAAATTGTACGCTGATAGTGATTTATTAGTGAATCTAATTACCTTCCAGGAGTTCGTGTTCCTTGATGAGGACATGGCTAATACCTTTGAAGCTTTTTATGATACAAAAGCATCGGATGATCTTGAACCAAGTGACAGGATGTTCAAGAAAGAGTTTAACTTTAAGAGTTTTGATGAATTGATTGTTAGTAATGAGATGGCACTAATAGATGACACTTTCAAATCATTGCCTGTACCAGTAATCTCTGATCACAAAAAGATGATAAATGTGCATGATATCATTGGAGAACTATTTTCGAATGTGAAGACCCTGCCCTTATATGCATCTGATGGAATTTACTTGAACTGGGATCTACTGGAAGAAGATAAATGCAATTACAATATATCTAATTGGTATCAGAACATATGGGCAAAGATAGATATCAACAACCATGATTTCAGAGGAAAATCTTTTGACGATACAGAAATGATATTTGATTTGGTTTTCTTTGGTGATACTGTAGGTAAATGCGACCTTCAACAAAGTGAAGAGTTGCAGAAGTTACTTTCTGATGGCATTTCTCAGCTTGAAAATCAGCCTGCAGAATTTTCAGCAAGCAAAGTTATAGAAAATGGATCTTCAAATCAAGGATATCGGGAACAATTACCTGAAAGAAATGCAGAGAGGGCATCATTATTATTTAAGTCTATGTCAGAAGTCAGTAACATTGATTATTTCTTAAATCCTCAAAAAGCAACCATTAAGGGGAGTTGCCACTTTGCAGTAGATTCCACCAATGCTAATGTTAATATTCCAAATGTTCCATCCACCGTATCGAAAGCTGGTCTACAATCACTAGGATGGCACACTGTTCTGCATAGAGTAAAGCTATCAGACAATATTGTGGCCCTTGCTAGATATTTTGAAAAAAGCTATCTGGCTATTTTGCAGAGTGATACAGAGCTGACAAAGACGCATAAATCAGATGTACATTATTTTGATTTTCTGAGTCTTCAAAAGCACAAGCTGATTGAATTCCATGTAAATGGAAATAATATGGCGTTTATTGTGTTAAGTGCAATTAAACAGGCAGTTTGGTACTTATGTTTCTATGGTCTCAAACCAGCATGCTTGTATCTGGAAAAACTATGTCAAAACACGGACTACTTGAAATCAAGATTAGGCATCCTCCAATCTTTGATCAAAGATGAAAACAGGAAGATGGAAAAAAATATTACCATGGCACACCCATCACTGACAATTGTCAAAGAAATTTTGCAGGCAAACATCAAACGGGATAGTTTGAAAGCTTTAATTGTGGCTGAAGAAGTATTCTGGTGGTCTTTGAAAAATCTCATTCTCTCCTTGGGGTTATCATTTGGCGAACTAAATAATTCTTACAGAAATCAGCCATTTGCAAATAATCTTCTGCCTGAGGACACTCATACTAAAGTGACGGAACTTCTGAGCTCAGACTGCTTGCTCGTGTCATTCAAGCATGTTTCTCCATTATTTCCATTCAACAAATTCAGCATTATCTTGGAATATGGTGGTTCACATGGCTCATCTAGAATATCTGAACTTTCATCAAACTCGGTTGGATTGCCTAATCTTCATTTTTTGATGGTTGAATTGGATGACCATGCCGTTCTCAAAGCACTCTGTGAAGGTGTTGAAATGCCTCCATATACTGAAATCTTGCTGGAAACCGAGACTCCTCTTATTTCCAATCACAAGGAAAGTATGGTGAAGCGAAAGTTTGAGCGACTATTGAACTTTTATCCTGTGGAACAAAGCTATGATATCAAATCTTCGAAGACTTCACTCGAAGCAGATAATTTGGTGCCTCTAATTCCTGCTGTGAAAACTGATTATGGCCATCAAAGCTTGGAGTCTTTTGCTGGATCAGTTATTATTGTAAATACTCAAAATGTAGATAAGGAGATGATAGTGTCTAGAAGAAGCTCTTACCAAGTAATTCTTGCAATGGAAAAAAGAGGAATTCAAGTTGTCGAACGTGATTTAGATTTACCAGTGGATATTATATTAAGTTCAGCAGTTTGCTTGGCATGGTATGATAGTAGAAACCTTGGGAAGAAAGCAACTCCAGCGAATGAGGCATCTTCAAGCTTACCTTTATATATTGAGAGTATTGCAACCGATGTTCTGCCATTGCTTAGTTTTTACTTTCGCAGCTGCTTTCTGGTCTTTGAAGGAGAATTTAACTTTCTTTCAACTGTTATGGAGTCCTCGGATGGACTTTATGCAGCAGCAACTAGTCTAGGAATTGATTTGCAGATTTTTTTCTCGTACTCACATGAATTGACCAATGAGATTATGGTAAATTGCATTAAGAGTACTGCCATTCAGACAAAGGGTCTGTATCCCAAAATGCCTGATTCGGTAACTCTAGCAGAGTCATTTCTTACACAATTTCCTGGAATAAATCCTTTAACAGCACATTCTATACTATCTTTAGAGGCCACACTTAATGAGTTTCTTGCGTGGTCACATGAACAAAGGATGTGTGTTTTAGAAAAATATCATGTTCCAGAAGAAAGTCTTTCTCTACTCGGTGTTTTCTGCAGATATGGGGAACGTGAGGATTCAAAATCCATAATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCAGACTCAGATAGGGGCCGCTTTTATCAAGTTGACAATAAAAGAAAAAGAAAAAACCCAGTGATAATTGATCAGAATGATGAACTATGTTTTGATGAATTGTTGCAATTCGAGACAATGAACCAAGAAGTTCAGGCTGCCCCAGATTCGTCTACCTTGCAAAATCATTTTGATTTTGGTATGTCAAGAGATGCTGGGAGATCCAGAGACTTGGGAAAAGATAATTTGGGCATGAATGACACCTTTTGCCAAAAGCAAAGAAACATTGAGACAACAATGGGAAAATCCCGAGTCTCCCAGTCACCGTGGAACTGCAGAGCTCCCCAAATGTCAGAGCAGCTAGAACAGCCCAGTTTATCTTTGAAAAATAGAAAGTTTTCTCAAAATGAAATAATGGATACTGGTTTGAATTGGCACAGCCTTGGTAATTTTGAGAAGCTGCATGATGACATTAGAGGTGAGGTGGTTAACTTGACTAATACTCCTCTATTAGATGAAAGCTTCTCCATTTCTGACACCAAGTATTTCCCAAATTTGATAACTGAGTCAGAGAAAGATCATATGAGAAACAGTAAAATTGTAAGGAAATTGTCATTTGATAACAGCATTCACCCAGAAACCAATTCAATATGGAGATCTATGAAAGATACAGGAGAAGTTGATCACCATGCAGAACCAGATTTTGGAAGAGATGCATTTCCTCTTGATTTCAATCCGCATGGAAACATTGATTCAACTCCAGTAAGAAATTTAGGTGGAATAACCTTCCAGGAGGGAATGTCATATTTGAGTGAAACTCCACTCTCACGTGTCCGTAGGTCAGGTACTCCGTTAAAGAATTCCCCTTGGACAACTGAATTTATTAATAAAGTCAAAGAAAAGAGCAAATTGCGTCAAAAATCAGCATTAAGTGGGAATATCAGTTCTTATTTTGGGTATCAAGGGAATATTTCGAAAGCTTCTAAGAAGAGAAGTCCCTCTATACTTGAGTCCTTTAGGTACCAACCTAGTAAAACACCAGGAAATATTCAGGAACAGAAAAGACAAAAGCAATCTGGACAATCTTCAAACTCAGCCAAGAAAGGAAGATATTCCGTTCCCTTATCTACATGGACTCCCAATGACAAGAGATCGACAAAGACACTGACATTTGGGAAGAGCGCAAGTGGAGGACAAACTAAGCTGGTCTGGAGTGATAGAAGAAAATATCAGGCACATTAA 4845 0.3903 MRTRFLNNDYFTLPSSQRHETIPFLHLPVPRLSTPPSSAVNHHLHLLYSPFPDVSLHIDPFPIQSALSSFLSSVLPHKIHLQSHDLEVPNPDRTSSVADYHNRGEREADFIFEDYISDADIEFSKESKTVTRSDENEVDYEPIQFETPEQLDALLENVCFTEKERMQMLSQTPKVENSMEMLMPESLMQYPYEDLESVSRVEDVISEYLKGDNAYTLEGNISVQPLPHSDKKTFLILEVDEESLGIPTSLSMVDIIESYFGDLKPQIFDERYQSITAGNELLDSKVHDMVKLFSEDCVSKKSLVLSDLFPERDFINMLENEHVGGNVALDGKLYADSDLLVNLITFQEFVFLDEDMANTFEAFYDTKASDDLEPSDRMFKKEFNFKSFDELIVSNEMALIDDTFKSLPVPVISDHKKMINVHDIIGELFSNVKTLPLYASDGIYLNWDLLEEDKCNYNISNWYQNIWAKIDINNHDFRGKSFDDTEMIFDLVFFGDTVGKCDLQQSEELQKLLSDGISQLENQPAEFSASKVIENGSSNQGYREQLPERNAERASLLFKSMSEVSNIDYFLNPQKATIKGSCHFAVDSTNANVNIPNVPSTVSKAGLQSLGWHTVLHRVKLSDNIVALARYFEKSYLAILQSDTELTKTHKSDVHYFDFLSLQKHKLIEFHVNGNNMAFIVLSAIKQAVWYLCFYGLKPACLYLEKLCQNTDYLKSRLGILQSLIKDENRKMEKNITMAHPSLTIVKEILQANIKRDSLKALIVAEEVFWWSLKNLILSLGLSFGELNNSYRNQPFANNLLPEDTHTKVTELLSSDCLLVSFKHVSPLFPFNKFSIILEYGGSHGSSRISELSSNSVGLPNLHFLMVELDDHAVLKALCEGVEMPPYTEILLETETPLISNHKESMVKRKFERLLNFYPVEQSYDIKSSKTSLEADNLVPLIPAVKTDYGHQSLESFAGSVIIVNTQNVDKEMIVSRRSSYQVILAMEKRGIQVVERDLDLPVDIILSSAVCLAWYDSRNLGKKATPANEASSSLPLYIESIATDVLPLLSFYFRSCFLVFEGEFNFLSTVMESSDGLYAAATSLGIDLQIFFSYSHELTNEIMVNCIKSTAIQTKGLYPKMPDSVTLAESFLTQFPGINPLTAHSILSLEATLNEFLAWSHEQRMCVLEKYHVPEESLSLLGVFCRYGEREDSKSIMTDCSSSVSSGPDSDRGRFYQVDNKRKRKNPVIIDQNDELCFDELLQFETMNQEVQAAPDSSTLQNHFDFGMSRDAGRSRDLGKDNLGMNDTFCQKQRNIETTMGKSRVSQSPWNCRAPQMSEQLEQPSLSLKNRKFSQNEIMDTGLNWHSLGNFEKLHDDIRGEVVNLTNTPLLDESFSISDTKYFPNLITESEKDHMRNSKIVRKLSFDNSIHPETNSIWRSMKDTGEVDHHAEPDFGRDAFPLDFNPHGNIDSTPVRNLGGITFQEGMSYLSETPLSRVRRSGTPLKNSPWTTEFINKVKEKSKLRQKSALSGNISSYFGYQGNISKASKKRSPSILESFRYQPSKTPGNIQEQKRQKQSGQSSNSAKKGRYSVPLSTWTPNDKRSTKTLTFGKSASGGQTKLVWSDRRKYQAH 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01375 1614 MobiDBLite consensus disorder prediction 1541 1602 - -
Trre11g01375 1614 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1609 IPR038824 GO:0007131
Trre11g01375 1614 Coils Coil 503 523 - -
Trre11g01375 1614 MobiDBLite consensus disorder prediction 1541 1614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01375 Trre-Chr11 13451794 13460112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01375 - - gmx:102663374 2108.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01375 11 13451794 13460112 Trre11g01375 11 13451794 13460112 ECH