Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01360 ATGGAGGACTCGAATTCCGATGAATGTTTGCCACCAGGTTGGACTGTAAAAGTGAATGTGAGAAAGAATGGTAAGATAGACAAGTATTACTTCCCTCCTTCGAGTGAGCAAAAATTCAATTCCATGGTAGGCGTATTTCGTTATCTCGACAATGCTAAGAAGAAAGCCAGCATCCACAAGAAAATCTCAAACTCAAACAATTCAGCAGATGTAACTATGAAACCAACTGTATCGGTTAGCTCGGGTGAGAACTCAGGTTTAGACGTGACAGTCAGTGATCAACAGGTTCCTCGCCGTGCTTCAAAGCGTCTTGCTGGAATTAAGGCCGGTCCACTTCCAGAACTTAAAACAATTCGAGCACGCCGAGATGTGGTTAAACAATCAGAGGAGGATGAAACTGTCGTAAATGCAGAGAGATCCACCGATAACTTACCGTTCCCTGCACTTGAATGTACTGAAAACAAAATGGAAAATCATGCTACTGAGAAAGATTGTGTGAAAGTCCTCAAAAACGGAGATAATGTTGATGCAAAATTAGATTACGCCAATGAATTTCCGCTAAAAGAAATACTAACCGATCCATGTATTGCGTTTGCGATACAAACTCTCACCGGAGAAACATTTGAGACCGCCAAAGACACTCATTCAGATTCAAAAAGCAAACAGCATTGTGAAAATTCTGCTTATACCGAAGAGCACGGTAAAAAAATCAATGTCGTGCACGATGATTCGGACGGACGCAAGGTGTTATCGTCTCCGGAAAAATTTACTCAAGTTGATAAGGTAGGATTGTCAAGTGTGAACTTATGCAAAAGTGATTACAATTGCAGCAAATACTGTGGTGAAGAAAGAAGGAATGTTTGTTAG 867 0.4095 MEDSNSDECLPPGWTVKVNVRKNGKIDKYYFPPSSEQKFNSMVGVFRYLDNAKKKASIHKKISNSNNSADVTMKPTVSVSSGENSGLDVTVSDQQVPRRASKRLAGIKAGPLPELKTIRARRDVVKQSEEDETVVNAERSTDNLPFPALECTENKMENHATEKDCVKVLKNGDNVDAKLDYANEFPLKEILTDPCIAFAIQTLTGETFETAKDTHSDSKSKQHCENSAYTEEHGKKINVVHDDSDGRKVLSSPEKFTQVDKVGLSSVNLCKSDYNCSKYCGEERRNVC 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01360 288 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 72 IPR001739 GO:0003677
Trre11g01360 288 Pfam Methyl-CpG binding domain 4 54 IPR001739 GO:0003677
Trre11g01360 288 Gene3D - 1 103 - -
Trre11g01360 288 SUPERFAMILY DNA-binding domain 7 54 IPR016177 GO:0003677
Trre11g01360 288 MobiDBLite consensus disorder prediction 67 97 - -
Trre11g01360 288 MobiDBLite consensus disorder prediction 67 100 - -
Trre11g01360 288 PANTHER OS04G0193200 PROTEIN 70 228 IPR038945 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01360 Trre-Chr11 13325702 13327907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01360 - - mtr:11439235 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01360 11 13325702 13327907 Trre11g01360 11 13325702 13327907 ECH