Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01353 ATGTCTAGGTCATTGGAACCACTTTCTGTTGGAAGAGTGATAGGAGAAGTTGTTGACATTTTCAATCCAAGTGTAAGAATGAATGTGACATATTCCACCAAACAAGTTGCAAATGGTCATGAGTTAATGCCTTCTATTGTTATGAACAAGCCAAGGGTTGATATTGGTGGTGATGACTTGAGGTCTGCTTATACTTTGATCATGACAGACCCAGATGCTCCTAGTCCTAGTGATCCACATTTAAGGGAACATCTCCATTGGATGGTCACAGATATTCCAGGTACCACAGATGTCTCTTTTGGAAAGGAGATTGTGGAGTATGAGAATCCAAAGCCAGTAATAGGAATCCATAGATATGTCTTCATCTTGTTCAAACAGAGAGGGAGACAAACAGTGAGAGCCCCAAATTCTAGAGACAATTTCAACACAAGAAGGTTCTCACATGAGAATAACCTTGGCTTACCTGTTGCTGCAGTTTACTTCAATGCTCAAAGAGAAACTGCGGCAAGAAGAAGGTGA 519 0.4085 MSRSLEPLSVGRVIGEVVDIFNPSVRMNVTYSTKQVANGHELMPSIVMNKPRVDIGGDDLRSAYTLIMTDPDAPSPSDPHLREHLHWMVTDIPGTTDVSFGKEIVEYENPKPVIGIHRYVFILFKQRGRQTVRAPNSRDNFNTRRFSHENNLGLPVAAVYFNAQRETAARRR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01353 172 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 64 86 IPR001858 -
Trre11g01353 172 CDD PEBP_euk 25 163 IPR035810 -
Trre11g01353 172 Pfam Phosphatidylethanolamine-binding protein 58 161 IPR008914 -
Trre11g01353 172 Gene3D - 2 172 IPR036610 -
Trre11g01353 172 FunFam Terminal flower 1 1 172 - -
Trre11g01353 172 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 10 167 IPR035810 -
Trre11g01353 172 SUPERFAMILY PEBP-like 12 166 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01353 Trre-Chr11 13230445 13232701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01353 K06910 - gmx:100174966 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01353 11 13230445 13232701 Trre11g01353 11 13230445 13232701 ECH