Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01317 ATGTCTAGAATGGAAACCAACATGGATTTTATCCAATGGCTCGGACCTGACTTGTCAATAAAGGTTTTCTCCTGTTTGGATGATCCTGGTGACCTTGTTCGTGCCTCAGCTGTTTGTAGCTCCTGGGAACATTTTGTTATTGTGAATGGGCTCTGCAAGCAACTATGCTTGAAAATGATTCCTGAGGTATCTGGTGTTGTTCCTAGAATTGAGAAATTCATAATTGAAACTGATAGGAACAAGTGTAAGCGTTATTATACAAATACAGAATGGGGGTGTCTTAGGAGAAATCATAAACTCTATGCGCACCTAGCTTTGGGTTTTACTCCTAGGAAGAACAATTGCATCTTATATGGCATGGACGTATCATTTTTCGACTCAAAGTACGAGGCTCTGGCGTATCGGCTGTGTTCAAATTTATGTCTTGTTACCGAGATTAATGTCCAACCATTCCTAGCATATTATGATAATGGCTTGCAAATGTATTCACCTAAGGCTGTCCGATTTAGATTGGGTTATCGGAGACGCGGCAAGGAATTAGAATCAATGATTGATTTTGATAAGACGTTGAATTTTCGTAAGAAATTCTGCTGGGCATATACTTCACCGAAATTTCCAATGTCTCAGGAAAATAAGTTGCAAACATTCAAGCTGCCTAAACCTGTTCTGTGTATTGGAGGTGTTCTACTTGTGGAGCTCTTTGTTAGCGGTCAAAAAAAAAAAGTGGATAATTATTTCCCCTCATGGATTACATGGTATGATGAATGTGAATCCCATGTTGAAGTTGTTGCACGAACAGTAATTTCTCCAGAATTGATTGTGAGGATTCATCCAGGTGGAAGGTACAGCTTATTATATTCCCCTCACGAGCACGATGAACGGGAGTGTAAATGCTTGTTTTTGGGGGAGCCTGGTTACTCTTACAATTGA 930 0.3989 MSRMETNMDFIQWLGPDLSIKVFSCLDDPGDLVRASAVCSSWEHFVIVNGLCKQLCLKMIPEVSGVVPRIEKFIIETDRNKCKRYYTNTEWGCLRRNHKLYAHLALGFTPRKNNCILYGMDVSFFDSKYEALAYRLCSNLCLVTEINVQPFLAYYDNGLQMYSPKAVRFRLGYRRRGKELESMIDFDKTLNFRKKFCWAYTSPKFPMSQENKLQTFKLPKPVLCIGGVLLVELFVSGQKKKVDNYFPSWITWYDECESHVEVVARTVISPELIVRIHPGGRYSLLYSPHEHDERECKCLFLGEPGYSYN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01317 309 Gene3D - 1 99 - -
Trre11g01317 309 CDD F-box_SF 13 42 - -
Trre11g01317 309 SUPERFAMILY F-box domain 5 86 IPR036047 GO:0005515
Trre11g01317 309 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 129 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01317 Trre-Chr11 12893969 12896343 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01317 - - tpra:123905922 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01317 11 12893969 12896343 Trre11g01317 11 12893969 12896343 ECH