Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01293 ATGATGAGGATGAGGAATAATAATAATCATAATCATAGCAATAAGACAAATGGTGTTTCTTCACCAATAAGCTCAGGTGGTTGCAGAACTGCTGAACCGGGTTCAATGGAATGGGAGATGAGACCAGGTGGAATGTTGGTTCAAACAAGAACCACTGCTTCAGATCGAAACCCTGTTTTGGTTCCTACAATTAGAGTTAGAGTCAAGTTTCGTTCAATTTATCATGAAGTCAACATTAGTTCACAAGCCTCATTTGGGGATTTGAAGAAAATGTTGTCAGGACCAACTGGTTTACATCATCAAGATCAAAAGTTGTTTTACAAAGATAAAGAGAGGGATTCTAAGGCTTATCTTGATGTAGTTGGTGTAAAGGACAAATCAAAGCTAGTTCTAATGGAAGATCCTATTAGTCAAGAGAAAAGGGCTTTGGAGTTAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCTATCTCACAAATTAGCTTGGAAGTAGATAGACTTGCCGGACGGGTATCTGCCTTTGAATCAATAATTAGCAAAGGTGGGAAAGTTGTGGAATCAGATGTACTTGGTCTTATTGAGCTATTGATGAATCAATTGCTTAAATTGGATGGTATAATTGCTGATGGAGATGTGAAATTGCAAAGGAAAATGCAGGTAACAAGAGTTCAAAAGTATGTTGAAAAATTGGATATGCTAAAAGTCAAGAATTCTATGACAAATGACAATGATATTCAAGCTCCAAAACAATCTCCACAAAAGCATTCAAATGGGAAAAGATTGGAACCAATTCAAGAACAATCACAACAAATTCATTCAAATGGTTATCATGGACCAATAGTACCAATTCAAGAACAACAAAAAGAACAATCTAGGAGCAACTCAAATGAACTTTCACTAGTTTTTGAGGAACAACAAAATCAACCCTCAGGAGTTGTAGTTACTACAAAATGGGAAACATTTGATTCTACCCCACCATTAATCACATTTCCATCCACATCCACAACTACTACTCCTTCAATGACCAATAATAATAATAATACTAATAATAATTCAGGTCCTTCTAAGTTCAGTTGGGAATTCTTTATGTGA 1095 0.3571 MMRMRNNNNHNHSNKTNGVSSPISSGGCRTAEPGSMEWEMRPGGMLVQTRTTASDRNPVLVPTIRVRVKFRSIYHEVNISSQASFGDLKKMLSGPTGLHHQDQKLFYKDKERDSKAYLDVVGVKDKSKLVLMEDPISQEKRALELRKNAKMEKAAKSISQISLEVDRLAGRVSAFESIISKGGKVVESDVLGLIELLMNQLLKLDGIIADGDVKLQRKMQVTRVQKYVEKLDMLKVKNSMTNDNDIQAPKQSPQKHSNGKRLEPIQEQSQQIHSNGYHGPIVPIQEQQKEQSRSNSNELSLVFEEQQNQPSGVVVTTKWETFDSTPPLITFPSTSTTTTPSMTNNNNNTNNNSGPSKFSWEFFM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01293 364 Gene3D BAG domain 134 239 IPR036533 GO:0051087
Trre11g01293 364 MobiDBLite consensus disorder prediction 326 364 - -
Trre11g01293 364 FunFam BAG family molecular chaperone regulator 1 62 133 - -
Trre11g01293 364 ProSiteProfiles Ubiquitin domain profile. 66 132 IPR000626 GO:0005515
Trre11g01293 364 Gene3D - 63 133 - -
Trre11g01293 364 SUPERFAMILY Ubiquitin-like 56 138 IPR029071 -
Trre11g01293 364 ProSiteProfiles BAG domain profile. 157 235 IPR003103 GO:0051087
Trre11g01293 364 SMART BAG_1 157 235 IPR003103 GO:0051087
Trre11g01293 364 CDD Ubl_AtBAG1_like 63 132 - -
Trre11g01293 364 MobiDBLite consensus disorder prediction 326 358 - -
Trre11g01293 364 SUPERFAMILY BAG domain 118 239 IPR036533 GO:0051087
Trre11g01293 364 MobiDBLite consensus disorder prediction 239 279 - -
Trre11g01293 364 MobiDBLite consensus disorder prediction 1 38 - -
Trre11g01293 364 MobiDBLite consensus disorder prediction 239 255 - -
Trre11g01293 364 PANTHER BCL2-ASSOCIATED ATHANOGENE 22 323 IPR039773 GO:0051087
Trre11g01293 364 MobiDBLite consensus disorder prediction 1 28 - -
Trre11g01293 364 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Trre11g01293 364 Pfam BAG domain 158 233 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01293 Trre-Chr11 12704709 12707277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01293 - - gmx:100819022 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01293 11 12704709 12707277 Trre11g01293 11 12704709 12707277 ECH