Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01243 ATGATGATAATCGATCCTCCCATCGCCGCCCGTTTCCACCTCACCGTCTCCGCCACTCGCTTTTCCTCCGCCGCACCTCATAATAACCGTTCAATGTGGACTACGGAGGATATGAATGGCGGATTAGGCTACGTGGCGTCGTGTCGTCGACTCGCTTGTAGCTGTGGTTTTGATGTGCCTTGGATAAGAAGTAAAAAGTACCCGGGCACTCCATTTACAAGAAGAAACAAACTTCTGAAGAATAGAATTCGAGTATCATCAGAACATCCCGGCTCAGATCAGGAGCCTGTAAAGAAAAATGAGAAGCCATCCTATCACCCATTTGAGGAAATAGTTGCCTCGACATTGGAGAATAGTGAAGATGTTAGACTTACTGCAGCAGAAACAAGTAGAACTGTTATTGAGGTTAACAGCAAAGCAACAATGGTGTTCTCAACTTACATTAATGATGATTTTCATGAAAATATTGTTTGGCCAGATTTGCCTTATTTGACAGATGAACATGGAAGTATATATTTTCAAGCAAAGAACGGTGAAGATATTTTGCAGTCCCTAACTTCCGAAAATAATTTTGTGCAAGTCATAATTGGTGTAGATACCATGGAAATGATCAATGAAATGGACTTATCAGGTCCATCAGAAATTGACTTTGGGATTGAAGAAATTGATGATCAAGATACTGATGATTTAGATGACAGCGATGATGATGACGAAGATGAAAATGAAGATGAGAATGAGGATTATGACTCGGAATGGCTGGCTGTTCTTTCAGATGAGGATGAACAAGATGATGATGATGATGAAACACTTGCAGACTGGGCAAAATTGGAGACAATGCGATTTTCTCATCCAATGGATTTTGCTAAAAAATTGACTGAGATTGCTTCAGATGATCCAATTGATTGGATGGAGCAGCCTCCGGCTTGTGTAGTCTTCCAAGGAGTCATTAGACCTGCATTTATCGAAGAAAATTCTCCAATACAGAAGCATCTATCAGCCAATCAATCCAGTACAGCCGAAATTAGTAAAGTCACAGAAAATAAAGATGAAAGTATCGGTGCAATTAATGGTTATGAGCACAATACAGAGTCGTCTGAAGATAATGCATCAAAACAGGTGGAAAATAATGGGAATAGTGATATACCTTTAGATGATACTTCCTTTTACAGATTGGAGATGGTTAAGATTCAAGTGTTCTCTGCACACGGACATCCTATTATCCTTGAATTAGAAGACTACATGAAAGCTCAACCTGATGCTATTGCAAGGTCATCTTCCAAAATTATATCTCATTTGAAAGCTGGTGGAGAATCAGAAAAGACTTTGCAAGCCCTTAAGTCTCTCTGTTGGAGATGCAAGGGTATTCAAGTGGAGGAGGCACAAATTATCTGTGTGGACTCCCTTGGGATTGACGTAAGGGTTTGTTCAGGAACTCAAGTTCAAACACTGAGATTCGGATTCAAGAAAAGGGCTACGTCAGAATACAGCGCCGAGAGACAGCTCAATGATTTATTATTTTCAAGAAATCACCCAAAGCAACCAAAAACGAAGCAAACACATCAAAATGAATGCTAA 1575 0.4006 MMIIDPPIAARFHLTVSATRFSSAAPHNNRSMWTTEDMNGGLGYVASCRRLACSCGFDVPWIRSKKYPGTPFTRRNKLLKNRIRVSSEHPGSDQEPVKKNEKPSYHPFEEIVASTLENSEDVRLTAAETSRTVIEVNSKATMVFSTYINDDFHENIVWPDLPYLTDEHGSIYFQAKNGEDILQSLTSENNFVQVIIGVDTMEMINEMDLSGPSEIDFGIEEIDDQDTDDLDDSDDDDEDENEDENEDYDSEWLAVLSDEDEQDDDDDETLADWAKLETMRFSHPMDFAKKLTEIASDDPIDWMEQPPACVVFQGVIRPAFIEENSPIQKHLSANQSSTAEISKVTENKDESIGAINGYEHNTESSEDNASKQVENNGNSDIPLDDTSFYRLEMVKIQVFSAHGHPIILELEDYMKAQPDAIARSSSKIISHLKAGGESEKTLQALKSLCWRCKGIQVEEAQIICVDSLGIDVRVCSGTQVQTLRFGFKKRATSEYSAERQLNDLLFSRNHPKQPKTKQTHQNEC 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01243 524 MobiDBLite consensus disorder prediction 330 379 - -
Trre11g01243 524 PANTHER CREG1 PROTEIN 73 508 - -
Trre11g01243 524 MobiDBLite consensus disorder prediction 223 251 - -
Trre11g01243 524 Gene3D - 417 522 IPR037119 -
Trre11g01243 524 MobiDBLite consensus disorder prediction 357 379 - -
Trre11g01243 524 SUPERFAMILY FMN-binding split barrel 381 505 - -
Trre11g01243 524 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01243 Trre-Chr11 12066723 12075529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01243 - - aprc:113867269 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01243 11 12066723 12075529 Trre11g01243 11 12066723 12075529 ECH