Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01237 ATGCATGAATATGAATATCCTTGTTGTGATTATAATTTTTGGTTGTATCTAATTATATGTCTAGTGATTGTGTCATTGGCAGGCATTACATCAGGCCTAGCTTTAGGAATATTGTCATATAATCCAGTTGATCTTGAGGTTCTCATTAAAGCAGGCAGACCAAAAGATAAAAAAAATGCAGAAAGGATTCAGCCATTTGTAAATCATGGACATTTTGTTTTGTGTACTCTTCTTCTAGGAAAATCATTGGCTATGGAGGCACTGCCAATTTTTATGGACACAGTCATCCCAGCATGGTTTACTATTCTTGTATCAGCAATATTGGTGACTGTATTTGCAGAGATTTTACCTCAAGCTGTATGCTCTAGATATGGACTTACCTTTGGAGCAAAATTGGCTCCTTTCACTCATTTGCTTCTGTTGATTTTCTTTCCAATAACTTATCCAGCAAGTAAGCTGCTGGATTGGGCTCTTGGGAAAGAACATTCAGTTCTTCTTAGAAGATCAGAGTTGAAGACATTTGTGGACTTGCATGCGGATCAGGCAGGAAAAGGTGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGTGCTATGGATTTGACTCAGAAGACAGCTAAAGATGCAATGACACATATTACTGAAACTTTTTCTCTTGATATAAATTCCAAACTAGACATGCATACAATGACACAAATAATGAGTAAAGGTCACAGTAGAGTACCTATTCATTCTGGCAATCCAAGAAATATTATTGGCCTCATCTTGGTTAAGAATTTAATCTTCTGCAGACCAGAAGATGAGACACCAATCAAGAATTTGATTATTAGAAAAATTCCTAGGGTATATGAAAGTTGGCCACTATATGAGATATTGAATCAATTCAAGAAAGGTCATAGCCATATGGCTGTTGTTTTGAAGGGAAAAATGGAAACAGAAAGCAATGAAGCTCATGCTGTGGATTCACCTATATTTTTGAATATAATAACTAATAAAGAATCAAACCAAATTCACATTAATGGAGAATCAAATTCTTCCTATGTACTAGAAATGAGTCAGAGAAGTTCAATTCCAGAATCAAGTGATGTGGAATTTCATAGTCCAACATTAGAAAATGTGATGGTACTAGACAATGATGTAGGACAAGAATCAAAGCAATGGGATCAAGAAATTGGATGTATGACACATGAGCAAATAATGTCACTTAATTCAGCTGTTATGCATGATGAGGCTATTGGTATCATTACAATGGAGGATCTTATGGAGGAGTTATTGCAGGGAGACATATTGGATGAAACTGATGAATATGTTCACCTTCAAAAGAACATTAGAATTAACCTGCGGCAATCACATAGATCACAATCAAGATCATCAAGAAGAACTTTTGGATCCAGTCGTCGTTGA 1407 0.3568 MHEYEYPCCDYNFWLYLIICLVIVSLAGITSGLALGILSYNPVDLEVLIKAGRPKDKKNAERIQPFVNHGHFVLCTLLLGKSLAMEALPIFMDTVIPAWFTILVSAILVTVFAEILPQAVCSRYGLTFGAKLAPFTHLLLLIFFPITYPASKLLDWALGKEHSVLLRRSELKTFVDLHADQAGKGGELSHHETSIITGAMDLTQKTAKDAMTHITETFSLDINSKLDMHTMTQIMSKGHSRVPIHSGNPRNIIGLILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEILNQFKKGHSHMAVVLKGKMETESNEAHAVDSPIFLNIITNKESNQIHINGESNSSYVLEMSQRSSIPESSDVEFHSPTLENVMVLDNDVGQESKQWDQEIGCMTHEQIMSLNSAVMHDEAIGIITMEDLMEELLQGDILDETDEYVHLQKNIRINLRQSHRSQSRSSRRTFGSSRR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01237 468 Gene3D - 192 332 IPR046342 -
Trre11g01237 468 CDD CBS_pair_CorC_HlyC_assoc 206 307 IPR044751 -
Trre11g01237 468 PANTHER METAL TRANSPORTER CNNM 3 455 IPR045095 GO:0010960
Trre11g01237 468 Pfam Cyclin M transmembrane N-terminal domain 18 188 IPR002550 -
Trre11g01237 468 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Trre11g01237 468 FunFam DUF21 domain-containing protein 190 323 - -
Trre11g01237 468 SUPERFAMILY CBS-domain pair 195 427 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01237 Trre-Chr11 12027050 12034646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01237 K16302 - gmx:100791387 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01237 11 12027050 12034646 Trre11g01237 11 12027050 12034646 ECH