Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01236 ATGAAAACTCTAATTTTTGCATCAAACCCATCTCTCCATTTCTCAAAACATTCTCCATTCAAACCAAAATTACCAATTTTTCACCCCAAAACATCAAAAAAGTTCAACTACAAATTAACCACATTGATACCACAAGCAAGTGCAAAAGGCTTCTCCAATACAAGAAAACCATCATCAACAAATAAAAAAAATAATGATGTTACTATCAACAAGAATCCCAACAATAAGGACAATGATGAAGAAGACGAGATTCCGACGGTAGTTATGTATAGAATAATAGGTAGAATATTGTTTAGTGTTTTAGTACCAATGGCATTAGGATTATCATTTTTACATCTTTATGGTGAGTTAAAGGAAAGAGAAATATGGAATGGTCCTTTATGGATACCATTTATGACAACTCTTATAACTTTTGGAGCTTCTGCACTTGGAATTGCATATGGTGTACTTTCTACTAGTTTGGATGCAGAAAGAGAAGGTTCTTTGCTTGGTTTTCAAGAAGTTGAGAAGAATTGGGTTGAGATGTGGCAACAAGAGACTGCAAGTGATGATGATTAA 558 0.3351 MKTLIFASNPSLHFSKHSPFKPKLPIFHPKTSKKFNYKLTTLIPQASAKGFSNTRKPSSTNKKNNDVTINKNPNNKDNDEEDEIPTVVMYRIIGRILFSVLVPMALGLSFLHLYGELKEREIWNGPLWIPFMTTLITFGASALGIAYGVLSTSLDAEREGSLLGFQEVEKNWVEMWQQETASDDD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01236 185 MobiDBLite consensus disorder prediction 49 72 - -
Trre11g01236 185 MobiDBLite consensus disorder prediction 49 81 - -
Trre11g01236 185 Pfam Photosynthesis affected mutant 68 34 178 IPR021855 -
Trre11g01236 185 PANTHER PROTEIN PAM68, CHLOROPLASTIC 1 183 IPR021855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01236 Trre-Chr11 12025193 12025750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01236 - - psat:127128967 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01236 11 12025193 12025750 Trre11g01236 11 12025193 12025750 ECH