Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01168 ATGGCGTCTCCCTATGAGGTTGAAGTGAAGCTCAACTCTGCCAACAACCTCAAAAACGTGAATTGGCGAAACGGTCCAAACCGCCCATATGTTGTTGTTTGGGTGGATCCCACACAAAAACGTTCAACCAACGTTGACGAGTCTGGAGACACTCAACCCAAATGGGATGAAAAACTTCTCATCCATTTACCACCATCATCAAGCATCAACAATTTTGTCCTATTCATTGATGTTCTTCACTCTGAGCCAAATGACAAGCCGCTCATTATTGGGTCAACTCAACTTCCACTTGATACAGTGGAAACCGAAGATGGATCAAGGGGAAATCGCACCTTGACGTTGAGGCGTCCTTCTGGACGCCCGCAAGGCACAATTGACATTAAAGTCATTGTAAAAAATACTGGCTATTGTGCACCTTATGGGGTTCCTCCACCACCATATGGAAATCCGTATGGTGCTCCACCTGCACCATATGGAAATTCATATGGTACAGGTGTGAGTGTAACATATGGGAATCCATACAATGTTGCACCACCTCCTCTAGGCTACCCTGTAGTCGCACCCACACCTACATCGTATGGGTACAGTCAAAGCACTCAACAAGGCCTAGGAAGTGGGCCGTCTGTGAATGTGACTGTTGGAGGGTCAACTGCACCAGAGAAGAACAATCAGAGTTATGGATACGGTCAAGGTGGTCAGCAAGGTAGTGGTTATGGGCAAAGTGGGCCAACTGTGAATGTGACCGTGGGAGGGGTGGCACCGGAGAAGAACAATGCCCCACAGAGCTTTGGATACGGCCAAAGCGGACTACAAGGGAATGGCTATGGGCAGAGTGGATCAACTGTGAATGTGACCGTTGGAAAAGAAGTGCAACAAGAGAAAAAAAGTAGCAAGTTTGGATTGGGGACAGGTTTGGTTATGGGTGCTGTTGTGGGTGGACTTGGTGCACTTGCATTAGAAAAGGGTATTGATGCGGTAGAGGACAAGATTGCGGATCGTGTGATTGAGAAACAAGAGATTGATGACTACTATGAAGAGTATTATAATGAGTACTAA 1056 0.4678 MASPYEVEVKLNSANNLKNVNWRNGPNRPYVVVWVDPTQKRSTNVDESGDTQPKWDEKLLIHLPPSSSINNFVLFIDVLHSEPNDKPLIIGSTQLPLDTVETEDGSRGNRTLTLRRPSGRPQGTIDIKVIVKNTGYCAPYGVPPPPYGNPYGAPPAPYGNSYGTGVSVTYGNPYNVAPPPLGYPVVAPTPTSYGYSQSTQQGLGSGPSVNVTVGGSTAPEKNNQSYGYGQGGQQGSGYGQSGPTVNVTVGGVAPEKNNAPQSFGYGQSGLQGNGYGQSGSTVNVTVGKEVQQEKKSSKFGLGTGLVMGAVVGGLGALALEKGIDAVEDKIADRVIEKQEIDDYYEEYYNEY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01168 351 CDD C2_SRC2_like 6 127 IPR044750 GO:0006952
Trre11g01168 351 PANTHER INGRESSION PROTEIN FIC1 6 306 - -
Trre11g01168 351 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Trre11g01168 351 SMART C2_3c 6 109 IPR000008 -
Trre11g01168 351 MobiDBLite consensus disorder prediction 194 241 - -
Trre11g01168 351 Pfam C2 domain 7 107 IPR000008 -
Trre11g01168 351 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 133 IPR035892 -
Trre11g01168 351 Gene3D C2 domain 4 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01168 Trre-Chr11 11191088 11192143 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01168 - - tpra:123904799 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01168 11 11191088 11192143 Trre11g01168 11 11191088 11192143 ECH