Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01164 ATGACAAGCCTCAACAACAACAGCATCGATACTGTTAACGCTGCCGCCACCGCCATCGTCACCGCCGAATCCCGAGTCCAACCTACCACCGCACCGAAAAAACGATGGGGAAGCTGCTTTAGCCTGCCGTCTTGTTTTGGATCTCATAATAAAACCAGCAAGCGAATAGGTCATGCTGTCCTTGTTCCTGAACCTGTTGCACCAACAGTTCCAGTCGCTAATGCCGCACCGAATCCTTCACCTACCATTGTAATGCCTTTCATCGCTCCTCCGTCTTCTCCTGCATCTTTTCTCCAATCTGATCCACCATCTTCGACTCACTCACCAGCAACTGGATTACTTTCACTCAGTTCTCTCTCTGTCAATGCTTACTCTACCTGTGGCCCTGCATCGATTTTTACCATAGGTCCATATGCCTATGAGACGCAGTTAGTTTCACCCCCGGTATTTTCCAACTTCACGACTGAACCGTCAACTGCTAATTTTACTCCTCCACCTGAATCTGTACATATGACAACACCGTCGTCTCCTGAGGTTCCATTTGCTCAATTGTTGGCATCTTCGCTGGCTCTTAAAGGTAACGGGACACACAAGTTTGCATTATACAATTATGAGTTTCAGCCGTATCATCAATATCCTGGAAGTCCTGGTGCTCAACTTGTATCACCTGGATCGGTTATTTCAACTTCTGGAACCTCTTCTCCTTTCCCCGATAGACGCTCATCACTTGAATTCCAAAAAGGGGAAGCACCCAAAATCTTGGGTTTCGAACACTTCTCCACCCGAAGATGGAGTGGTTCAAGAATGGGATCCGGGTCGTTGACACCAGAAGGTGCAGGGCAAGGTTCAAGACTAGGTTCAGGATCTTTGACGCCCGACGGTGCTTCACATGCATCGCGATTAGGTTCTGGCTGTGCAACACCTGATGGTCTAGGACAGGAATCCAGATTAGGTTCAGGCTCTTTGACTCCTGATGGCACTGGTCCAACTTCTCGAGACAACTTCAATGTGAATAACCAGATTCCTGAGGGTGTATTTGTTGCAAACTCGGATCACGGATATCAAAGTAATCCAACATTAGTTGATCACAGAGTTTCATTTGAATTAACCGGCGAAGATGTTGCACGATGTCTTGCAAATAAAACTGGAGCATTACTTCGAAATATGTCTAGTTCTTCGCAAGGTATACTGGCCAAAGACCCTATTGACAGAGAAAAGATACTAAAAGACACCAATAGTTGTTGCGATGTGTGTTCAGGGAAAACAATAGGAGAGCAGTGCTGTCAGAAGCGTAACTCTGTTAGTTCTTCCAAAGAATTCAATTTCGACAGCAGAAAAGGTGACGTTTCTAGCACATCTGCGAATGGCTCTGTGTGGTGGACTAACAAGAAAGGTGGTAGGTCGGGCAATAGTTGGGCGTTCTTCCCAATGTTACAACCAGATATCAGCTAA 1452 0.4628 MTSLNNNSIDTVNAAATAIVTAESRVQPTTAPKKRWGSCFSLPSCFGSHNKTSKRIGHAVLVPEPVAPTVPVANAAPNPSPTIVMPFIAPPSSPASFLQSDPPSSTHSPATGLLSLSSLSVNAYSTCGPASIFTIGPYAYETQLVSPPVFSNFTTEPSTANFTPPPESVHMTTPSSPEVPFAQLLASSLALKGNGTHKFALYNYEFQPYHQYPGSPGAQLVSPGSVISTSGTSSPFPDRRSSLEFQKGEAPKILGFEHFSTRRWSGSRMGSGSLTPEGAGQGSRLGSGSLTPDGASHASRLGSGCATPDGLGQESRLGSGSLTPDGTGPTSRDNFNVNNQIPEGVFVANSDHGYQSNPTLVDHRVSFELTGEDVARCLANKTGALLRNMSSSSQGILAKDPIDREKILKDTNSCCDVCSGKTIGEQCCQKRNSVSSSKEFNFDSRKGDVSSTSANGSVWWTNKKGGRSGNSWAFFPMLQPDIS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01164 483 MobiDBLite consensus disorder prediction 264 296 - -
Trre11g01164 483 MobiDBLite consensus disorder prediction 264 338 - -
Trre11g01164 483 MobiDBLite consensus disorder prediction 221 240 - -
Trre11g01164 483 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 482 IPR040420 -
Trre11g01164 483 MobiDBLite consensus disorder prediction 314 338 - -
Trre11g01164 483 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01164 Trre-Chr11 11121775 11125247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01164 - - gmx:100806399 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01164 11 11121775 11125247 Trre11g01164 11 11121775 11125247 ECH