Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01132 ATGAAGGAAAGGTCACAAGATCACCAACAGCTTTTTTGGGCAAGAGTGGTTATGAGGAAATGGCTTAATATTAGAAGCAATGAATCTGATTATAGTGCTGACCCTGAAGATGATGATGATGATGATGATTATGATGAAGATGATGATGAAGAAAATGAAGAGTGCGGAAGACAGTCACGGTTTATGGACAGCAGAGGTGTTGAAGCTCCATCTGAATTAAATGACTTTGTTCCAAGGTTAAGGAAACAGAAGTCATCAACTTATAGATCTCAATATATAAACACAAAGGAACTCAGGGTATGTGCTGCGACATGGAATGTTGGAGGAAAACTTCCACCTGATGACCTAGATATTGATGAATGGCTTGGTGTCAATGAACCAGCTGACATCTATGTCCTCGGTCTTCAAGAGATGGTACCCTTAAACGCTGGTAATATTTTTGGGTCTGAAGATACACGCCCTGTTCCAAAATGGGAGAATATTATTCGGGAAGCACTTAATAGAGTCCGTCCTTCAGTAACGAAGACAAAATGCTTCAGCGATCCTCCATCTCCATCCAAATTTAAGCCATCCGATGACGGACCTGATATAGAAGATGAAATATTATTTGAAAGTGATAGCGACATTGGCGAAGAAGTTCATCCTTTGGATGAAGAGCAGAATATTTGCGATGGAAGTACTACTGACGAAATCATGAATACAAGTTTATTGGCTTCTGATGTTGCTGATAGTGCCAAGTCCAGTATTCCGATTGCAATTGATTATAGAAGACAGTTTTCTTTTCCGAAGTGGCAACCAAGTCCATCAGAAAACATGGATACGGCAATATCTCAAAAGTCCAAGAAACTAACCAGAATGCTTAGTGGATCCGAAAGGATTGGTTTGAGCTGGCCGGAGCCTCCATTACATCTGCTATCTCAGAGAGTTTTGGACAGACCGACTTCTTTTAAATCATTCAAATCCTTTAAGTCAATCAAATCATTCAAAACATATAGTTCTTTCAAGTCAATTATGGATGACATGCCAGGATTGGGTTTGCTTCCTGAAATTGACCTTGAAGCTTTATTGAAGCGGAAAAAAAGATCTCCATATGTAAGGATTGTTAGCAAGCAAATGGTTGGAATTTTCATCACCATATGGGTTCGTCGGAGCTTACGTAAACATATTCATAATTTAAAGGTTTCAACTTTAGGCGTTGGCATTATGGGATATATTGGTAACAAGGGATCAGTATCTGTCAGCATGTCCATATATCAGACGCTTTTTTGTTTTATATGCACTCACCTTTCGTCTGGTGAAAAGGAAGCAGACGAGCTTAAAAGAAATGCTGATGTTCATGAAATACTTCGCAGAACTCATTTCCATTCACCACCTTATATCGGCCTTCCTAAAGGAATCCTCGATCATGAAAGAATAATTTGGTTGGGCGATTTGAATTACCGTATCAGCTTATCTGAGGTGGAAACAAAAGCTCTTATCTCGAAAAAGCAATGGTCAAAATTGGCTGAGAAAGATCAGCTCGTGCGAGAACTCAATAACGGTGCATTTGGAGGGTGGTCAGAAGGGAGATTAAACTTCCCACCAACTTATAAATATGAGGTTAATTCAGATAAGTACTATGGTGACGATCCCAAGTCTACAAAGCGTACACCAGCATGGTGTGATCGTGTTCTTTCATATGGCAAGGGAATGAGATTACTGAGTTACAGAAGAACTGAGCTCAAAATGTCAGATCACAGACCCGTGACTGCTACATATATCGTTGAAGTTGAGGCGTTCTCACCTAAGAAGCTACAGCGAGCTCTAACATTCACTAATGCAGAGATTGAAAATGGAGAAGCCGTTACAAGTTTAATTAGTTGGAAATAG 1869 0.3975 MKERSQDHQQLFWARVVMRKWLNIRSNESDYSADPEDDDDDDDYDEDDDEENEECGRQSRFMDSRGVEAPSELNDFVPRLRKQKSSTYRSQYINTKELRVCAATWNVGGKLPPDDLDIDEWLGVNEPADIYVLGLQEMVPLNAGNIFGSEDTRPVPKWENIIREALNRVRPSVTKTKCFSDPPSPSKFKPSDDGPDIEDEILFESDSDIGEEVHPLDEEQNICDGSTTDEIMNTSLLASDVADSAKSSIPIAIDYRRQFSFPKWQPSPSENMDTAISQKSKKLTRMLSGSERIGLSWPEPPLHLLSQRVLDRPTSFKSFKSFKSIKSFKTYSSFKSIMDDMPGLGLLPEIDLEALLKRKKRSPYVRIVSKQMVGIFITIWVRRSLRKHIHNLKVSTLGVGIMGYIGNKGSVSVSMSIYQTLFCFICTHLSSGEKEADELKRNADVHEILRRTHFHSPPYIGLPKGILDHERIIWLGDLNYRISLSEVETKALISKKQWSKLAEKDQLVRELNNGAFGGWSEGRLNFPPTYKYEVNSDKYYGDDPKSTKRTPAWCDRVLSYGKGMRLLSYRRTELKMSDHRPVTATYIVEVEAFSPKKLQRALTFTNAEIENGEAVTSLISWK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01132 622 SMART i5p_5 272 594 IPR000300 GO:0016791|GO:0046856
Trre11g01132 622 FunFam Type I inositol polyphosphate 5-phosphatase 1 79 182 - -
Trre11g01132 622 FunFam type IV inositol polyphosphate 5-phosphatase 3 317 617 - -
Trre11g01132 622 MobiDBLite consensus disorder prediction 27 64 - -
Trre11g01132 622 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 609 IPR045849 GO:0004445
Trre11g01132 622 Gene3D Endonuclease/exonuclease/phosphatase 76 181 IPR036691 -
Trre11g01132 622 Gene3D Endonuclease/exonuclease/phosphatase 337 617 IPR036691 -
Trre11g01132 622 MobiDBLite consensus disorder prediction 32 53 - -
Trre11g01132 622 SUPERFAMILY DNase I-like 78 606 IPR036691 -
Trre11g01132 622 MobiDBLite consensus disorder prediction 175 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01132 Trre-Chr11 10799939 10805485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01132 360 591 Acyl Lipid Metabolism Gene Families AT2G43900 28.727 4.17e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01132 - K20279 psat:127128044 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01132 11 10799939 10805485 Trre11g01132 11 10799939 10805485 ECH