Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01036 ATGGAAACACAAACATTACGGTTATGTTATCCATTCACACTCATCAACACCAAAACTAACAACAACTGCCGCAAAACACTCTCTCCTCTTTGGCGCTCTCTCATCACCAAATCTCACACTTCCATTTTCTCCAAACTGGAAGCCACCAGCAACAGCAAGGCATCATTCAACGAGGCTGCTTTCGAGGCGGAGCGGCTTGCCCTCGACGCCGAAGCTCGACAGGCAATGGCAGCTGAGGAGGAAGAATCTTCTCTTAAAGATGATCCGAAAGCTTGGAAATGGGTAATTAGAAAAAGAATTTGGGATTTAATGGAAAGGAATAATTTTGCACAAAATCCAAGACCTGTTCATCATCGAATCCCTAATTTTGTTGGTGCTTCTATTGCTGCTGATAAGATGAGGGAGCTAGATGTGTTCAGCACTGCACAATGTGTGAAGGTTAATCCCGATTCTCCTCAAAAGCAAGTCAGATTTCTCACTCTTTCAGATGGAAAGAAGTTGTTAACTCCTCAACCACGCTTGCGGACTGGTTTTTTCTCTGTAATTGAGTCCAATATGTTAACTTCAGGTACCATCAAGGAAGCCTGTACTTCTGTTGGAGTTGCCAAATATGGACGGCCAACTGGATTAGATGAAAAGATAAAGGTAGATCTTATTGTTATTGGATCTGTTGCTGTTGACCCGAAGACAGGTGCTCGATTGGGAAAGGGAGAGGGATTTGCCGAACTTGAATATGGTATGCTACGGTATATGGGAGCTATCGATGATTCAACACTAGTTGTTACCTCTGTGCATGACTGCCAATTGGTGGATGACATTCCAATCGGAAAGCTGTTAATCCATGATGTACCGGTGGATATCATTTGTACTCCAACCCAAGTCATTTTTACACATACATCCATTCCGAAGCCTCAAGGAATTTATTGGGACAAATTGTCTCCTGAGAAACTTGGACAAATTCGTATACTTCGAGAACTGAAGCGGAGAATTGAGCTAGAGACTGGACAAAAACTTCCTACTGGTCCATCAGAGAAACTACCCCCTACTGCTCAACGAAATAAAAGAGGTTAA 1071 0.4295 METQTLRLCYPFTLINTKTNNNCRKTLSPLWRSLITKSHTSIFSKLEATSNSKASFNEAAFEAERLALDAEARQAMAAEEEESSLKDDPKAWKWVIRKRIWDLMERNNFAQNPRPVHHRIPNFVGASIAADKMRELDVFSTAQCVKVNPDSPQKQVRFLTLSDGKKLLTPQPRLRTGFFSVIESNMLTSGTIKEACTSVGVAKYGRPTGLDEKIKVDLIVIGSVAVDPKTGARLGKGEGFAELEYGMLRYMGAIDDSTLVVTSVHDCQLVDDIPIGKLLIHDVPVDIICTPTQVIFTHTSIPKPQGIYWDKLSPEKLGQIRILRELKRRIELETGQKLPTGPSEKLPPTAQRNKRG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01036 356 Gene3D - 90 300 IPR024185 -
Trre11g01036 356 Pfam 5-formyltetrahydrofolate cyclo-ligase family 93 291 IPR002698 -
Trre11g01036 356 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED 75 355 IPR002698 -
Trre11g01036 356 Coils Coil 68 88 - -
Trre11g01036 356 FunFam 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 124 300 - -
Trre11g01036 356 MobiDBLite consensus disorder prediction 333 356 - -
Trre11g01036 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 92 310 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01036 Trre-Chr11 9484872 9489103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01036 K01934 - gmx:100797707 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01036 11 9484872 9489103 Trre11g01036 11 9484872 9489103 ECH