Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01011 ATGGAGCTAGAATTGGGACTCAAAATCACCAAAACTAGAGATGACATTGATTCCATATCTGAGTATCAATTTATGAAAGATACAGGACCAGTCTTTAAATCTAGAGAAACTAACACTATGTTCATCCTCACTGCACATCTTAAAGGTTTTAAGAGGAATAACATTGACATCAATATTAGTAAAGATGGGAATAAAATATCAATTAGAGGAAAGAAGCCAATTCAAGAAATGGTGATGATGGGATGGGTAATGCAAAGGAAAGTGGTTGATGTTAAAGGCTTCAATAAGGTTTTCAAAATTCCTTATGGTGTAAATTTGGATAAGATCAAAGCAAATTACAATGAAGAGGAATGGATGTTAAATATTGTCATGCCAAAATTGGTGAAAGGGATTTTAGGTCTTAAGATTGAGGAAACTAAGGAACAAGAATTTGACAAAGGAAGAACAAAACAAGGGACAAATGATTTTGATAATGTTTCTAGTAGTGTTGGTGAGACAAGCCAAAAAGAGTCAAAAGAATCTGAATTTCAACATATGGAAGGAAGTGAAAATATCATTGAGAAGATGATTGATGACACCAAGAAGGAAATAAATGAAGAGAGAATGAAAAAAGAAGTTGGAGAATATAAGTTGAGAATTGAAGATGGAAATGGAGAGAGTGTGAGAGGAAAAGGTTGCAAGGAAGAATATGATGCAAGCAAGAAAATGGAAATAGATCAAAGTGTTGGTGTATTTATGTCAAAGGAAATTGAAGATACAAGTCAAGATAAAGAGTTTAAGGATCAAAAGTTGAATAGTAGAAGTGTTGATGATGTTAATAGGGACTTAATTGGAAGCATAATTAAAGAAGATAAAGAAGAATCTAAGTTGGGGATTAAGGATAGTAAGGTAAAAGATACAAGCCAATTAGGTTTTGAAGAGTCTATCATTCAACAAAGTGGAGAGTCAAAACAAAAGGAATTTGAAGAACAAAAGGTTAGATTTGAAGAAAGTATTAAAGAAAGTAGTAAGGAACCATTTGAAGCAATGAAGGTACCAAAACTTGATGAAAATGTAGTTGATCATATTTCTAACAACATTGGTAGTATAAACCAAACTCAATTGAAAGAGGAATATGAAAAGCCACCTTTTGAAGCCTATGAAGATGTTCAAAAAACCATGTTTGGAGATACCATCCAAAAGGAAATCATAAAGCCTAACAAAGAAGGATTTAATGCAAAGATCAATGAAGGGTTTCCTAAAAACTTACCTAAAAATAACCAAAAGATGCAAAAAACAAAAAATGAGAAAGAAAAAATGGTGAGCAAAGAGGTTGAATATTTTGTAGAGAAGGATGAAGGTGAAAGATTGAAAATGATGCATGTGGAAGCAAAGAAAGGTAATAATACAGTTGAGACAATGAAAAAAGAAACTGAAGAAAGTGATAATGAAATCAAGGAAAATGATAAACAACAGGTTGAAAAGATCGAAGGAAGTAACGAAATTAATGATGCAAAGAAGGAAGAACAAAAAGAGGTCATGAAAGAATCATTAGTTGAAAATGAAAGTTTAATAGTGGAAGGAGATGAATACAAGGAGAGAACAAATGAAAAAGTCCAAGATGAGGAAGATAAAATTGAAAATAGTATAGTGAAGTTGAAAGGAGAGGGATCTACAAAGATGCATGTTGAAGTAAATGAGCCTTTAGAGGGAGAGAATGTTAATAATGGAATATTTGATGGAAGAGACACAAAAATGTTTCATGAGATTGAACAAACTAAAGATGTCAATGAAAAAGGTGAAAATGTTGAACATTCTCTGATGAAAGTAAATAGTGATAAATATGAGAAGATACAAAATGAAGAAAATGAAGGATTGAATGTTCGAAAGGAGCTAGAAATCAAAGATGTCATAGAAAATGTGGTCAAAAGAAAAGGCAAAGAGATTGAATATTTTGTAGAGAATGGAGAAGATGATAGACTCAAAAGCATGCATGTGAAAGCAATGAAAGGAAATAATGCAATAGAGACAATGCAAGATGAAATTGAAAAGAGTGAACATGGAATTAAGGAAAGTGGCAAAGAACATGCAAATGAGAATACTATAAAAGAAGAGTTGCCACGGCAGGTTGCGGAGATCGATGAAACGAAAGAATTCGTTGTTGCAAAAGAGGATGAAAAATATAAGGTTTTGAATGAAGGATTGGTTGAAAGTGAAAGTTTGGTGGAAATGGTACAAGGAGAAGAATCCAATCAGATGACAAAGGCAATCGTTCGAGATGATGAAGATAAAATTGAATACATTATAGAGAAGTTCAAAGAAAATGGACCTGCAAAGATACATTTTGAACCAAATGATCCTTTTGAGAGGATTGAGAAAGAAATTAGAAATCAAAATCTTGAGCCTATTAATGAGTTAAGTGAAAAAGAGAATGCTAATATTGGAATATTTGATGGAAGAAAAGCAAATAAGTTTCAAGAAATTAATCAAACTGAACATGTCAAGGAAAAGAATGCAAAAGTTGGAAATTTTGCAAAGATTGTAAATGAGAAGATACAAAATGAAGAAGATGAAGATTTGAAGAAAAACACAACAAAAGAAAAAGATGAATGTTGTTTCCAAGAAGAGATGAGTGAAAAAATATGCCAAGAAACCATGTCTGGAAAAGAAGATTTTTCAATGAAAATGTTAGATTCACAAATTGATTCAAGAGAAAGACCAAAGGATAGAAAAATGGAGAAAACAAAAGGTATCAAAGAAGAGAGTTCAAAAGTAGAGAAAGAGAAATATGAAAAGATGCAAGTGGAAGAAAATGATGGTTTGAGGAATGAAATAACTAAGAGAAAACAAAATGAAAGTGAGAAAACTAAACTTGTAACAAAGATTAAAGATCAACAATCTTTACAAAAAGAGAAGAGTAAAAGAAGAAATGGAGCAAGCACAATGGAAAGGGAGCTTCCTATGAAATCAATAGATTCACTTGCAAAGTCTAGAGAAGGGCCAAAGGATAAAGAAATAGATGAAAAAAAAATTGTTGAGTCTACAACAAAAGAAGAACTTCAATGGTTTGAGATTGAAACAACTAGTAAGGTTTTGTTCGAAGAAAATGAGGAAAATAATTCAAAAGCGAAAGAGATAGGAACTCCTAAAAGAACATTTCAATCAGTTGCAAGCACGGGATTTAAGGAGTTCGATTATGGGAATGCAAAGGATAAGAAACAAAAAAAGAAGTTGAAGAAGGAGGAGACACATGAATCAAAAGATGAAAGTATCAACCAAGATATTCTAAATCAAAAGAAAACAAAAGATGGAGGAGAACAATGCGGTTATAACAATGTAAGCGCAAAAGAGGTTGGAACTATAGATGATGAAGTTGTGAAGTCATTATCAACACCAAAGTTTCAAATATCACAATCTGAAGTTGAAGAAAAAGATAAATTAAGTGAAGGTGGCAAAGCAAATTACAAAGGTTCCATAGAATCAGAAATGCAAAATCATACAAAGGATATCCAAAATTTTATTGAAATGAAGGAAAATGAAGAGGTTGAACAAAATGACACTTTGAAGCAAGAATTGCGTCTAGAAAAAGAGCTAAAGAAAGAAGAAAAAGGCGAATTTCTAAATGGAGAAACAATGCAAGAGAAAATTGATGAGCCTAAGAATAAATACAAAAATCAAAATGCAAATGATGAGAATTTCAAGATACATGGTGAAATTTCAAAAGATGGTATTGAAAATGAAAAATGCTTTCATGAAGAAATGAAAACTAAAAGGCCTATTGAACTAGAAAAAACTATTGTGCAGTGGAAATTTCCAAAGACAAAAGATCAACATGATTATGGAACTGAAGAGATGAAATTTCTGAAAATTGCAGCAAGTCAAGAAGCTAAACCATCAAAGTTACAGAGGTCAGTGAATAATCAACAATCCACGGAGAAAATAAAAGCTATTGAAGAACATGAATCAACAAAAGATTCACCAAAGCTAAGTATTGTGGAAACTGCAAAAATTGAAAGTTTGCAGCCACAGTTCCTTGCTGGACAAGAAAATGTTTTGCAGAAAAAAGAAAAGCCAAAAGTTGCAAAGATTGAAGACAAACTTGCTTCAAAAGTCCAAAGAAATATCATAAAAACAACTCAAACCACAGAAGAAAAGGAGCTTAAAATGAAGAAAATAACTACACCATTTGAGAAAGCTAGTGGATCCAAAAGGGTGGAAGAAAAAGTGCATGACACTCCAGATAGAGAACTTCAAAGAGAAATTCAAGAAGTAACTTCTAAAATGGGGGAATCATATACTACAGGTGAAAGGAAGGATCCTCAAGAATTAACAAGGCCAAACATGGAATGTGAAATTTCAAAGGTAAAAGAAGTAGGAAAAGAAAATGAGGTGGAAAGTCACATTCATGTACTAGAAGAAACCATTTTTAAAGAAGAAGGAACAAATGCTAATGAAGTAGAATCCTTAGAAGCAAGTTTGAACAATGATAGTGTACAACATGAGTCTAGACCAGAAGAGATTAAGCAACCGAAAAATGCAACATATCAAGAAGCAAAAACACCAAAGTTACAAAGTTCAAGGATTAAGCAACAATTCAAGGATGAAATAAACAGAAAATCAGAAGAAAATATTGATAGTTTGCCACCACATCTCCTTGATGAACAAGAAGTACTTTATGTGCAAGAGAACAATGATAAGAAAGGATTTCATACACCCGATATTGTCGAAGAAGAAAGAGTTGTGACGAAAACAGAAGGACCAATGGTTGGAAAGAATGAAGAAACTAAAAGAGTGAGTAGAAAATCAAAAAGCAAAGAACAAAATAAGCCTAAATTGAAGGAATTAACTACACAGTTTGAGAAGGCTGGTGGATCCAAAAGTGTAGAAGAAAAAGTGCATGAAACTCCAAAGAGAGAACATCAAAGAGAATTAGAAAAAGTAACTTCTAAAATCGAAGTTAAAGAACCAACTACAGTTGAGAAAACTCCAATAAAAGGAGTTGAAATGAAAGAACCTCTTGAATTGACAAGTCCACCAAACATGGTCAATGAAATTTTAAATGAAGAAGAAAAGTGTGAAGAAAAAGAGGGGCAAAAGAACATTCAAGTACTAGAAGAAACCATTGCTAAAGGAAAAGAAGATAGAGGTCACCAATATGTGCAAGAGAAGAATAATAAGAAAGGATTTCAAACACAAAAGACTATAGAAGAAGAAGAAGTTTTGAAGAAAATGGAAGTGGCAAAGATTGCAAAGAGTGAAGAAACTAAAGATGATCACACATTCAAAAGACAAGATGAAAAAACTACTCAAGCCTCAAAATTTGATGAAGCTAGTAGTGGATCCAAAAGGGTAGGAGAAAAAGTGCATGAAACTTCAGATAGAAATCATCAAAGAGAATTAGAAGAAGTCACTTCTAAATTGGACAATGAAATTCCAAAGGATACAAGTAGTCAACTAAACTCTACGGTACCAAAGAATTCGCCAACAAAAAAACATTTTCATACCGCGGAGGATACTCCAACATTAGAACTAGTAGCGGATAAAGTTGTTCAACAATTAGAGGTTCCTAGCACATCATGCACTCAACAATTGAAATTTGAAGGAGAAGAAAAAGCAAAGGAAAGTGAATCTAAAATAGATGTTGATGAGTCAAAAAAATGTAAAAGAGGCCAAGAAATTGGACAATGCATAAACAATGATGAGGAAGCAATGCATGGAATAGAAGAAATTAAAGATGAAGAAAAAGATAATGAGGAAGTGTTTGAGGGACAAAAAGAAAATGAAGATGAAACAAGAGGAGGGAAAAAGGACAAAGCAAAAATATCAAAGGAAATTTTTGTTCCATTGGTTATAGCAGGATCAGCACTAATTGTAACTCTAATAGCTACCTTTGTTCGCCAAAGAAGAGCTAGAAAAAGGTAA 5901 0.3257 MELELGLKITKTRDDIDSISEYQFMKDTGPVFKSRETNTMFILTAHLKGFKRNNIDINISKDGNKISIRGKKPIQEMVMMGWVMQRKVVDVKGFNKVFKIPYGVNLDKIKANYNEEEWMLNIVMPKLVKGILGLKIEETKEQEFDKGRTKQGTNDFDNVSSSVGETSQKESKESEFQHMEGSENIIEKMIDDTKKEINEERMKKEVGEYKLRIEDGNGESVRGKGCKEEYDASKKMEIDQSVGVFMSKEIEDTSQDKEFKDQKLNSRSVDDVNRDLIGSIIKEDKEESKLGIKDSKVKDTSQLGFEESIIQQSGESKQKEFEEQKVRFEESIKESSKEPFEAMKVPKLDENVVDHISNNIGSINQTQLKEEYEKPPFEAYEDVQKTMFGDTIQKEIIKPNKEGFNAKINEGFPKNLPKNNQKMQKTKNEKEKMVSKEVEYFVEKDEGERLKMMHVEAKKGNNTVETMKKETEESDNEIKENDKQQVEKIEGSNEINDAKKEEQKEVMKESLVENESLIVEGDEYKERTNEKVQDEEDKIENSIVKLKGEGSTKMHVEVNEPLEGENVNNGIFDGRDTKMFHEIEQTKDVNEKGENVEHSLMKVNSDKYEKIQNEENEGLNVRKELEIKDVIENVVKRKGKEIEYFVENGEDDRLKSMHVKAMKGNNAIETMQDEIEKSEHGIKESGKEHANENTIKEELPRQVAEIDETKEFVVAKEDEKYKVLNEGLVESESLVEMVQGEESNQMTKAIVRDDEDKIEYIIEKFKENGPAKIHFEPNDPFERIEKEIRNQNLEPINELSEKENANIGIFDGRKANKFQEINQTEHVKEKNAKVGNFAKIVNEKIQNEEDEDLKKNTTKEKDECCFQEEMSEKICQETMSGKEDFSMKMLDSQIDSRERPKDRKMEKTKGIKEESSKVEKEKYEKMQVEENDGLRNEITKRKQNESEKTKLVTKIKDQQSLQKEKSKRRNGASTMERELPMKSIDSLAKSREGPKDKEIDEKKIVESTTKEELQWFEIETTSKVLFEENEENNSKAKEIGTPKRTFQSVASTGFKEFDYGNAKDKKQKKKLKKEETHESKDESINQDILNQKKTKDGGEQCGYNNVSAKEVGTIDDEVVKSLSTPKFQISQSEVEEKDKLSEGGKANYKGSIESEMQNHTKDIQNFIEMKENEEVEQNDTLKQELRLEKELKKEEKGEFLNGETMQEKIDEPKNKYKNQNANDENFKIHGEISKDGIENEKCFHEEMKTKRPIELEKTIVQWKFPKTKDQHDYGTEEMKFLKIAASQEAKPSKLQRSVNNQQSTEKIKAIEEHESTKDSPKLSIVETAKIESLQPQFLAGQENVLQKKEKPKVAKIEDKLASKVQRNIIKTTQTTEEKELKMKKITTPFEKASGSKRVEEKVHDTPDRELQREIQEVTSKMGESYTTGERKDPQELTRPNMECEISKVKEVGKENEVESHIHVLEETIFKEEGTNANEVESLEASLNNDSVQHESRPEEIKQPKNATYQEAKTPKLQSSRIKQQFKDEINRKSEENIDSLPPHLLDEQEVLYVQENNDKKGFHTPDIVEEERVVTKTEGPMVGKNEETKRVSRKSKSKEQNKPKLKELTTQFEKAGGSKSVEEKVHETPKREHQRELEKVTSKIEVKEPTTVEKTPIKGVEMKEPLELTSPPNMVNEILNEEEKCEEKEGQKNIQVLEETIAKGKEDRGHQYVQEKNNKKGFQTQKTIEEEEVLKKMEVAKIAKSEETKDDHTFKRQDEKTTQASKFDEASSGSKRVGEKVHETSDRNHQRELEEVTSKLDNEIPKDTSSQLNSTVPKNSPTKKHFHTAEDTPTLELVADKVVQQLEVPSTSCTQQLKFEGEEKAKESESKIDVDESKKCKRGQEIGQCINNDEEAMHGIEEIKDEEKDNEEVFEGQKENEDETRGGKKDKAKISKEIFVPLVIAGSALIVTLIATFVRQRRARKR 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1803 1822 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 518 560 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 168 183 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 153 167 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 982 1004 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 454 511 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 888 975 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1705 1724 - -
Trre11g01011 1966 CDD ACD_sHsps-like 35 126 - -
Trre11g01011 1966 Gene3D - 24 127 IPR008978 -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1741 1765 - -
Trre11g01011 1966 Coils Coil 1680 1700 - -
Trre11g01011 1966 Coils Coil 464 484 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1903 1930 - -
Trre11g01011 1966 Coils Coil 1156 1176 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 454 573 - -
Trre11g01011 1966 Coils Coil 318 338 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1063 1104 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 142 183 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1487 1522 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 676 699 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1063 1094 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1425 1441 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1197 1227 - -
Trre11g01011 1966 Coils Coil 1178 1198 - -
Trre11g01011 1966 SUPERFAMILY HSP20-like chaperones 29 126 IPR008978 -
Trre11g01011 1966 Coils Coil 911 931 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1506 1520 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 878 1004 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1617 1661 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1375 1441 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1393 1416 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1130 1157 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1557 1673 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1557 1609 - -
Trre11g01011 1966 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 142 IPR002068 -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1741 1832 - -
Trre11g01011 1966 Coils Coil 525 549 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 1772 1802 - -
Trre11g01011 1966 MobiDBLite consensus disorder prediction 405 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01011 Trre-Chr11 9236589 9243743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01011 - - tpra:123904130 2415.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01011 11 9236589 9243743 Trre11g01011 11 9236589 9243743 ECH
Trre11g01011 11 9236589 9243743 Trre1g05240 1 58371195 58372144 PCT