Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00957 ATGTTCACCATTTCATCCTCAACATTCACAAACACCAATATCATCTCATTTTCATTCCCTTCTCATTCATCTTCAATCTCTTCATCCCATTCACAAAATCCAATCTTTCACACAACCCATTTCACAAAACCAATTCTTTTTCAAAACCCACTTTCCATTTCCCTCAGAAAACCCATCACCACCATAGTTTTCTGCAAGTCACTTGAAGCTTCATCAGAGTCAGAAGAGCCAACAAACCCAGAAGATGAGTGGCTTCAGAAACTACCTGATAAGACTAAACCTCTTTACTCACATAGCTTACCTTGTATTGAAGCATGGTTGAAGAGTTTGGGGTTTAATCAGAGTAAGGATGAAAGGGCTTCGTGGATTGTGAATAAGGGTGATTGGCACGCTCAGCTATCTCTTGATGTCACTGATCTCTACATTAGGTACTTGAAGAGTGGACCTGGGAATCTTGAAAAAGATGTAGAGAGAAGGTTTAGCTATGCTTTAAGCAGAGAAGACATTGAGAATGCTGTACTTGGAGGACCATAG 534 0.4007 MFTISSSTFTNTNIISFSFPSHSSSISSSHSQNPIFHTTHFTKPILFQNPLSISLRKPITTIVFCKSLEASSESEEPTNPEDEWLQKLPDKTKPLYSHSLPCIEAWLKSLGFNQSKDERASWIVNKGDWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00957 177 PANTHER OS05G0569200 PROTEIN 2 177 IPR021489 -
Trre11g00957 177 Pfam Protein of unknown function (DUF3143) 110 176 IPR021489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00957 Trre-Chr11 8374414 8377813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00957 - - tpra:123905779 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00957 11 8374414 8377813 Trre11g00957 11 8374414 8377813 ECH