Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00176 ATGAAACCAAACTTACCATCTCGTGATATTTTCAAAAACCTCATTCTATTTCATTACTCTCTCACTTTTTCATCTTTCAGGTTGATTTTTAGAGGAAAGATTTGTTCTTTTTTGATGGGTATGTTTGAAACTGAATCAAAGGAACCATTTGGGGTTTCTTCTAGTTTAGCAGAAAATGTTATGGTTGATGGTTCAGAGCAAGAGAAGAATGAGAATGGTGTTGTAGTTGAAGTTGTTAAGAGTAGTGTTTTCGAGACCGAGGTTGTTTCGGTTTTGAAGGAAAATGATTCTCAGGTTGTGGCTGATTCTGAGGTGAATAATGGAAGCTTTGTTTGCGAGAAGGTGGATTCCGAGGAGAAAGTAGTAGAAGGTGCTGTTTTGAGTGGTGATGTTGAAGAGAGAAAAGATGAGAATGTGAAGGAAAATGAGGGGGGAAAAGATGAAAATGCCGATGGAAAAATTGATACTGTTGAGGTTCGAACTGTGGAGATAAGTGAGACTGTTGATGTTGAAGTGAAAGGGATGGAGAGTGAGGAAGGAAAAAATGATGAAGTTGTGAATGAAGTTCCAATACTGGAGATAGGTGAGAACATCGAAGTTGAAGTGATTGGGGAGGAGAGTGAGGAAGGAAAAAAAGACGATGTTGTGAATGAGGTTCCGGTAGTGGAGACAAGCGAAAGCGTTGATGTTGATGATTTAGCTGATGAAAGGTCGGATTTTTCGGTTGGCGATTTTGTTTGGGGGAAAATAAAGAGTCATCCTTGGTGGCCAGGCAGAGTTTATGATCCGTCTGATGCTTCGGATTATGCTTTGAAGCTGAAACAAAAGAACCGGCTTCTAGTGGCGTACTTTGGGGATGGAACATTTGCTTGGTGCCATCCGTCACAGTTGAAGCCTTTCAAGGAGAATTTTGATGATATGGCGAGACAGAGCTCTAAAGGTTTTACCAATGCTGTTCAAGAAGCTGTAAATGAGGTTGGAAGGGTTCTGGTTATGAAGATGAGTTGTCCGTTTGTTGTGGCGGGGGAAACTGAGTCTGATTTTTCTCCAGTGTTGGCAAAAAATGCGGGAATCAAGGAAGGAGTTTTTGTGCCTGAAAGTGGCATTGAGAGAATTTCGGCTGTTACAATTGAACCAGCTGAGTTACTTTCTCAACTGAAACAAATTGCTGAAATGGTTGATGTTGCTAGTAATCTTGAGCTGGAGATATTAAAGGCTCAGCTTTCGGCTTTTTATCTCTCGAGAGGTGGATATAAGTTACCTTGTTATGAGGATCCCAAACGGGTTCTCGGACTTGAAGATAAAGATGATGTAGAAAATGCAGTTGAAGCACCGTTCCAAGGGCCGTTTGATGAGGACTATTCGAATCTGACACTGAGTCCAAAATCGGGCGAACCACGTCATTCTCCAGGGCTTTCAGGAAGTAGATTGAACCCTCAAAGAAAGCAGAAAAGCATTGCTGACATTATGGGGGAGGATAAAGATGATGCAAGTGATGAAGCTCTTGACACAATTAGGTCAAGAAGCAGAAAGAAGAAAAAAGATGGCGACGATGCAGCGGCATCTAAACCAGCTCGGAAAAGAAAAGAGTTGGTTATAGATACTGATGGAAAGTTTGTAAGAGCTGGAAAAGAAAGCCGTGAGGGGGAGGAAAACAGCGACAAGGGCAATTCACTGCGTTCGAACGAGAAAAAAGAAGAAGCTTCTGCCAATGAGAACATCAGTAGTGAGGGGAGCGAAAAGGAAAACGATGAAGGGAAGTCGAAAGAACAAAATGAGAATGGTTTTTCGCCAAGAGAAAGAAAGAAAAGCAAGTACTTGTCGCCACCTTTCACTAATTCAATCAGGGAGCTTGTGAAGGGAAGAGTAAAACCAGAAGCCAGGGGTGCCGACAAGCTTTCTCCTCGAGTTCCAAAGCGTAACAGTGAGGCATCTCAAGAGTTGGAACTTGCTGATAACTCAAATCACCAAACACGAGATGATGAGAAAAAGACTATTGATCCAGAGAAAGTCAAGGTTCCTTCGGGTGAAATTCTGTCCAAAATCCGTGATGCAGCTGTCAGTCCACAAATTTCTAGGGAGGGCACTTCTGATAGATTGGTAGACTTTGTTTCTGTCATGAGAAGTTCATTATATCGCGAAGGATCGTTTCACAAAGAATACAAGAAAACTCGACCTGGAACTGAAAGGAAGAGAAAGAAGTCGGAATCTGAACTTGGTCAGTCCGATCCCATATCACCTAATGAAGGTGGAAAGAGGAAAAAGAAGTCGGAATCTGAACTTGGTCAATCCGATCCCATATCACCTAATGAAGGTGGAAAGAGGAAAAAGAAGACGGAATCTGAACTTGATCAATCAAAACAAGTATCACCTAATGAAAATTCTGAACCTGCTAAGAAAAGAAAGGAAACAGGTTCAAGCATGTCAAAAGGGAAGAAAAGAGCTCGTGAAACCGAGACTAGCGGCAAGAAAGGGACCAATGAAAAATCTTCACCAGCTGTGCTTTTTGTGTCGTTTTGGCCAGGATCATCCAATCTGCCTTCAAAATCTGATCTTATCACAATATATGGTAAGTTTGGTGCTCTGAACGAAGAAGAAACCAATATGTTCCTTACTAATTACACTGCTCGAGTTTCCTTCTTAAGAAGTCGTGATGCTGAGAAGGCGTTGAAGCAGTCGCAAAAGAAAAACCCGTTTGAGCCATCTGAAGTAACTTTTCAGCTCCAGTGTGCTGAAACTGGAACCAAGTCTGGAGGAGAACACAAGGAAAGATCAAAGAAATCCAAACCTTCACAAGGCAAGAAGAAAGAAAAGGCTCCAACACCAACCGCGCCATCACTGTCACAGGGTAGCGACACATCTAATTTGAACTTCGTAAAAAATAAACTTCAAGGTCTGCTCTCAATGATTCAATCATCCGACGACAACTCACTTGATTTGAAGACAAAGGTAGAGAGCGAGGTGAAAGGTCTTTTGGAGGACGTGAACAACATGGTTGTATCTACTTCGTCGTGA 3015 0.4206 MKPNLPSRDIFKNLILFHYSLTFSSFRLIFRGKICSFLMGMFETESKEPFGVSSSLAENVMVDGSEQEKNENGVVVEVVKSSVFETEVVSVLKENDSQVVADSEVNNGSFVCEKVDSEEKVVEGAVLSGDVEERKDENVKENEGGKDENADGKIDTVEVRTVEISETVDVEVKGMESEEGKNDEVVNEVPILEIGENIEVEVIGEESEEGKKDDVVNEVPVVETSESVDVDDLADERSDFSVGDFVWGKIKSHPWWPGRVYDPSDASDYALKLKQKNRLLVAYFGDGTFAWCHPSQLKPFKENFDDMARQSSKGFTNAVQEAVNEVGRVLVMKMSCPFVVAGETESDFSPVLAKNAGIKEGVFVPESGIERISAVTIEPAELLSQLKQIAEMVDVASNLELEILKAQLSAFYLSRGGYKLPCYEDPKRVLGLEDKDDVENAVEAPFQGPFDEDYSNLTLSPKSGEPRHSPGLSGSRLNPQRKQKSIADIMGEDKDDASDEALDTIRSRSRKKKKDGDDAAASKPARKRKELVIDTDGKFVRAGKESREGEENSDKGNSLRSNEKKEEASANENISSEGSEKENDEGKSKEQNENGFSPRERKKSKYLSPPFTNSIRELVKGRVKPEARGADKLSPRVPKRNSEASQELELADNSNHQTRDDEKKTIDPEKVKVPSGEILSKIRDAAVSPQISREGTSDRLVDFVSVMRSSLYREGSFHKEYKKTRPGTERKRKKSESELGQSDPISPNEGGKRKKKSESELGQSDPISPNEGGKRKKKTESELDQSKQVSPNENSEPAKKRKETGSSMSKGKKRARETETSGKKGTNEKSSPAVLFVSFWPGSSNLPSKSDLITIYGKFGALNEEETNMFLTNYTARVSFLRSRDAEKALKQSQKKNPFEPSEVTFQLQCAETGTKSGGEHKERSKKSKPSQGKKKEKAPTPTAPSLSQGSDTSNLNFVKNKLQGLLSMIQSSDDNSLDLKTKVESEVKGLLEDVNNMVVSTSS 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00176 1004 MobiDBLite consensus disorder prediction 653 677 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 499 606 - -
Trre11g00176 1004 CDD PWWP 243 325 - -
Trre11g00176 1004 Gene3D - 231 333 - -
Trre11g00176 1004 PANTHER ALDOLASE-RELATED 52 936 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 713 739 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 712 833 - -
Trre11g00176 1004 SMART PWWP_4 240 301 IPR000313 -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 770 784 - -
Trre11g00176 1004 Pfam PWWP domain 243 324 IPR000313 -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 132 151 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 889 955 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 619 646 - -
Trre11g00176 1004 SUPERFAMILY Tudor/PWWP/MBT 237 344 - -
Trre11g00176 1004 ProSiteProfiles PWWP domain profile. 242 303 IPR000313 -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 445 677 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 895 914 - -
Trre11g00176 1004 MobiDBLite consensus disorder prediction 794 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00176 Trre-Chr11 1418857 1422318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00176 - - psat:127119440 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00176 11 1418857 1422318 Trre11g00176 11 1418857 1422318 ECH