Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme825940g00001 TCCAACAAAGTAACAACAGCTTACCTGAATCACATACAGAGAGGTAAGCAGATTCAGCCTTTTGGGTGCTTGCTAGCTTTAGACGAGAAAACGTGCAAGGTCGTTGCATACAGTGAGAATGCACCTGAGATGCTGACTATGGTGAGTCATGCTGTTCCTAGTGTCGGTGACCATCCTGCCCTTGGCATTGGAACTGACATAAGGACTATCTTCACTGCACCGAGTGCTTCTGCGTTA 237 0.4726 SNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIFTAPSASAL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme825940g00001 79 Pfam PAS fold 7 79 IPR013654 GO:0006355
Trme825940g00001 79 Gene3D PAS domain 12 79 - -
Trme825940g00001 79 SUPERFAMILY PYP-like sensor domain (PAS domain) 12 78 IPR035965 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme825940g00001 1 79 Histidine Kinase Gene Family AT1G09570 82.278 4.49e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme825940g00001 K12120 - gmx:547810 149.828