Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4938 ATGAAAATCTCAAAAGAAACATCATGTTACTCTTACACACATCTCCCATGGCCATGTCAACCTCGTACAGATCAAAATCACTTAGTTTTTTCCTACCGTTTTCGTGTCACCTGCACGGTGAGTCTTCTACTCTTATTCACCACCGTCTACATTTTCTGGCCGTCGGATCCATATCTCAAGATCGTACGGTTAAAACTGAAGAAGATTAAGATACATCGTGTGCCACGCATCACCGTAGATATTTCCATGCTTCTCACGCTGAGAGTGCAAAATGCTGACATGTATTCAATGGATTTCGGAGCGGTTGACGTGGCGGTATCTTATAGGGGGAAACCATTAGGTCACGTGACGTCGGAGAATGGGCACGTGAGGGCCATGGGATCTTCGTTTGTGGATGCTGACTTGGAATTTGCTGGCATTGGTGTGTTGCCGGAGATAGTGTTTTTGTTGGAGGATCTGGCTAAGGGTACGGTGCCATTTGATACGGTTAGTGAAGTTAAGGGCAAAATGGGGATTCTATTTTTTTATTTTCCTATTAAGGCTAAACTATCATGTGAGGTTTTAGTGAGTACGATAAATCAGACAATTGTTCGTCAACATTGTCTTTATGAGTGA 615 0.4309 MKISKETSCYSYTHLPWPCQPRTDQNHLVFSYRFRVTCTVSLLLLFTTVYIFWPSDPYLKIVRLKLKKIKIHRVPRITVDISMLLTLRVQNADMYSMDFGAVDVAVSYRGKPLGHVTSENGHVRAMGSSFVDADLEFAGIGVLPEIVFLLEDLAKGTVPFDTVSEVKGKMGILFFYFPIKAKLSCEVLVSTINQTIVRQHCLYE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4938 204 Gene3D - 55 189 - -
Tpr7g4938 204 Pfam Late embryogenesis abundant protein 86 179 IPR004864 -
Tpr7g4938 204 PANTHER EXPRESSED PROTEIN 7 203 - -
Tpr7g4938 204 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 203 - -
Tpr7g4938 204 SUPERFAMILY LEA14-like 43 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4938 Tpr-Chr7 57134412 57135851 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4938 - - cam:101505811 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4938 7 57134412 57135851 Tpr7g4938 7 57134412 57135851 ECH
Tpr7g4938 7 57134412 57135851 Tpr4g0614 4 5752360 5756667 PCT