Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4883 ATGGATGGGAGTTTAAGTAGAAGCATAAGTAGGAGTTTAAGTAGGTCAAGTTGGAGAATGGAAGAAGTGTTTGCTAGTGGAAGATATTCTAGAAGAACTTCTAATGTTGATGAAGATGAAGAAGCACTTAAATGGGCTGCCATAGAAAAGTTGCCAACTTATGATAGGCTAAGAACAAGTATCCTTCAAACATATGCTGAAGAATATGGTGATCAAGATCATCCAAATAGAGTTCAACATAAGGAAGTTGATGTTAGAAAGCTAGATGTGAATGAAAGACAAAAATTTATAGATAAAATCTTCAAGGTTGCTGAAGAAGATAATGAAAAGTATTTGAGCAAATTCAGAAACAGAATTGATAAGGTTGGTATTCGACTCCCAACAGTAGAAGTGAGGTTTGAAAATCTTAGTATTGAGGCAGATTCCTATGTTGGTAGCAGAGCTTTACCAACCTTACCAAATGTATCATTGAATATGCTTGAATCAGCTCTACGTATTTTTGGTATTAGTACTGCCAAAAAAACTAAACTCACTATTCTTAAAAATGTTTCTGGCATTATTAAACCTTCTAGGATGACCCTTTTACTAGGTCCCCCTTCATCAGGGAAAACGACTCTTTTGCTAGCTTTGGCTGGAAAACTTGACACTGACTTAAGGGTAGAAGGAGAAATCTCTTACAATGGATACAATCTCAATGAGTTTGTCCCTAGAAAGACTTCAGCATATATTAGCCAAAATGATGTACATTTGGGAGTAATGACTGTAAAAGAAACATTGGATTTTTCAGCTAGATGCCAAGGAGTTGGGACACGATATGATCTATTGTCTGAGCTTGCTCGAAGGGAAAAGGATGCTGGCATATTTCCTGAGGCAGAACTAGACCTATTCATGAAGGCAACTGCAATGGAAGGAACAGAAAGCAGTCTCATTACAGATTATACGCTCAAAATACTAGGACTTGATATATGCAAAGATACCATTGTTGGTGATGAAATGCAGAGAGGCATATCTGGTGGCCAAAAGAAGCGTGTAACAACAGGTGAAATGATTGTTGGGCCTACAAAAACACTTTTTATGGATGAGATATCAACTGGTCTTGATAGTTCCACAACATATCAGATAGTAAAATGTTTCCAACAAATTGTACACCTCACTGAAGCAACAATATTCATGTCCTTACTTCAACCTGCTCCTGAGACATTTGATCTATTTGATGATATTGTCTTAATATCAGAAGGTCAAATAGTATATCAAGGCTCACGTGAACATGTCATTGAATTCTTTGATTCTTGTGGGTTTAAATGTCCTGACAGAAAAGGAACTGCAGATTTCTTGCAAGAGGTTACATCAAGGAAAGATCAAGAACAATATTGGTCAAACAGAAACATACCATACCGTTATATAACAGTCACAGAATTTGCAAACAGATTCAAACAATTCCACATTGGAACACAGCTTCAAAATGAACTATCTATCCCATTTGACAAATCAACAGGACATAGAGCATCTCTTGTTTTCAAGAAATACACAGTTCCTACAATGGAACTTCTCAAAGCATGTTGGGACAAAGAATGGCTTTTAATAAAGAGAAACTCATTTGTTTACATATTCAAGACAGTTCAAATATGCATTGTTGCTATCATATCAGGAACTGTTTTTATAAGAACTGAAATGCATAGAAGGAATGAGGGTGATGCTGCTGTTTATATTGGTGCTATTTTGTTTACTATGATCATGAACATGTTCAATGGTTTTTCTGAGATGCCAATGACTATTGCAAGGCTTCCTGTGTTCTACAAACATAGAGATCATCTTTTTCATCCTCCATGGACTTATACACTTCCAAATTTTTTTCTAAAGATTCCTATTTCAATTTTTGAGGCTATTGTTTGGGTTCTTATTACATATTATACTATTGGATTTGCACCTGAAGCTAGCAGGTTCTTCAAGCATTTGTTGTTGGTGTTTCTTGTTCAACAAATGGCAGCTGGAATGTTTAGGGTAATATCTGGAGTTTGTAGGTCAATGATTATTGCCAACACTGGTGGAGCCCTCATGCTTCTTCTTGTTTTCTTACTTGGAGGTTTCATCCTTCCTAAACGTGACATTCCAAATTGGTGGGTGTGGGGCTATTGGATTTCTCCATTGTCATATGCTTTCAATGCTTTTTCTGTGAATGAAATGTTTGATCCAAGGTGGAGCAAACCGTCTTCAGATGGTTCAACTTCATTAGGTGTAGCTACATTGAATAACTTTGATGTTTATGCTGAAAAATATTGGTACTGGATAGGTGTAGCAGCTCTTCTTGGTTTCACTATTTTATACAATGTTCTCTTCACTCTTGCACTTATGTACCTTAATCCTATTGGAAAGAAACAAGCAATTATATCAGAAGAAGAAGCAACTGAAATGGAAGCTGGAGGAAATTCCAAGGAGGAACCTAGACTTGTAAGGAAGGAGTCCAACAAAGGCAATAGCAAAAGAGAAGTAGCAATGCAGAGAATGCCAACACTTGAGTCGGCCAATGGAGTTGCTCCAAAGAGAGGAATGGTTCTTCCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTACTATGTAGACATGCCAGCAGAAATGAAAGAGCAAGGAGTATCAGAAAATAGGTTGCAATTGCTTAGAGAAGTAACTGGTGCATTTAGGCCGGGAGTTCTAACTGCGTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCTGGAAGGAAGACAGGTGGTTACATTCAAGGAGATGTTAGAATCTCTGGCTTTCCTAAGAACCAAGAAACCTTTGCAAGAATCTCCGGATACTGCGAACAAACTGATATCCATTCACCCCAAGTTACTGTCAGAGAATCTGTTATTTACTCGGCTTTCCTTCGATTACCTAGAGAAGTCAATAATGAGGAAAAAATGAAATTTGTGGATGAAGTAATGGATTTGGTGGAGTTGGATAATCTTAGGGATGCTATAGTTGGCCTTCCAGGTGTTACAGGGTTGTCAACTGAACAACGAAAAAGACTAACAATAGCCGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCTACTTCAGGTCTTGATGCAAGAGCAGCAGCAATTGTTATGAGGACAGTGAGAAACACTGTTGACACCGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGTATCGATATCTTTGAAGCCTTCGATGAGCTACTTTTGATGAAGAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGAAGAAATTCACACAAGATTATAGAATATTTCGAGGCAATTCCAGGGGTCACAAAAATTAAGGATAAGTACAATCCAGCTACATGGATGTTAGAGGTAAGCTCTATAGCAGCTGAAGCTAGACTTGCAATGGACTTTGCTGAATACTACAAAACCTCAACATTGCATCAGAGAAACAAAGCTCTTGTAAGTGAGTTAAGTACTCCTCCACCAGGAGCAAAAGATGTATATTTCACCACTCAATATTCTCAATCAACTTTGGGACAATTCAAATCATGTCTATGGAAGCAATGGTTGACTTATTGGAGAAGTCCAGATTACAATCTTGTTAGATATTTCTTCACATTGGCTGCAGCTCTCATGGTGGGAACAGTCTTTTGGAAAGCCGGCAAGAAAAGGCATAGCTCAGCTGATTTGAACACGATTATAGGAGCATTATATGGTTCTGTATTTTTTGTCGGTGTCAACAATTGTCAAACTGTTCAACCAGTAGTAGCGGTTGAAAGAACTGTTTTCTATAGAGAAAGAGCAGCTGGAATGTATTCTGCTTTACCTTATGCCATTGCTCAGGTTGTTTGTGAAATACCATATGTATTTTTTGAAACTATATATTTTGCATTCATAGTGTATGCTATGGTAGGCTTTGAATGGAAAGTGGAGAAGGTGTGTTGGTTCTTCTTTGTGAGCTTCTTTTCCTTCTTGTACTTCACATACTATGGGATGATGACAGTTTCCATTACACCAAACCACCAAGTGGCTGCAATCTTTGGAGCAGCTTTCTATGGACTCTTTAATCTCTTTTCTGGTTTCTTTATCCCAAGACCAAAAATTCCTAAATGGTGGATTTGGTATTATTGGATTTGTCCAGTGGCATGGACAGTGTATGGATTAATTGTGTCACAATATAGAGATGTGACAGTAGGCATAAGTGTGCCTGGTGAGACTGAAAAAATTGCCATCAATAAATTTATTGAAGAACATTATGGATTCAAACCAGATTTCATGGGGCCAGTTTCTGCTGTTTTGATTGGTTTCACTGTATTTTTTGCATTTATATTTGCCTTCTGCATCAAGGCATTGAATTTCCAAACCAGATAA 4386 0.3771 MDGSLSRSISRSLSRSSWRMEEVFASGRYSRRTSNVDEDEEALKWAAIEKLPTYDRLRTSILQTYAEEYGDQDHPNRVQHKEVDVRKLDVNERQKFIDKIFKVAEEDNEKYLSKFRNRIDKVGIRLPTVEVRFENLSIEADSYVGSRALPTLPNVSLNMLESALRIFGISTAKKTKLTILKNVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDTDLRVEGEISYNGYNLNEFVPRKTSAYISQNDVHLGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMQRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIVLISEGQIVYQGSREHVIEFFDSCGFKCPDRKGTADFLQEVTSRKDQEQYWSNRNIPYRYITVTEFANRFKQFHIGTQLQNELSIPFDKSTGHRASLVFKKYTVPTMELLKACWDKEWLLIKRNSFVYIFKTVQICIVAIISGTVFIRTEMHRRNEGDAAVYIGAILFTMIMNMFNGFSEMPMTIARLPVFYKHRDHLFHPPWTYTLPNFFLKIPISIFEAIVWVLITYYTIGFAPEASRFFKHLLLVFLVQQMAAGMFRVISGVCRSMIIANTGGALMLLLVFLLGGFILPKRDIPNWWVWGYWISPLSYAFNAFSVNEMFDPRWSKPSSDGSTSLGVATLNNFDVYAEKYWYWIGVAALLGFTILYNVLFTLALMYLNPIGKKQAIISEEEATEMEAGGNSKEEPRLVRKESNKGNSKREVAMQRMPTLESANGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVSENRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIQGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESVIYSAFLRLPREVNNEEKMKFVDEVMDLVELDNLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVTKIKDKYNPATWMLEVSSIAAEARLAMDFAEYYKTSTLHQRNKALVSELSTPPPGAKDVYFTTQYSQSTLGQFKSCLWKQWLTYWRSPDYNLVRYFFTLAAALMVGTVFWKAGKKRHSSADLNTIIGALYGSVFFVGVNNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVFFETIYFAFIVYAMVGFEWKVEKVCWFFFVSFFSFLYFTYYGMMTVSITPNHQVAAIFGAAFYGLFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYRDVTVGISVPGETEKIAINKFIEEHYGFKPDFMGPVSAVLIGFTVFFAFIFAFCIKALNFQTR* 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4883 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
Tpr7g4883 1461 CDD ABCG_PDR_domain2 856 1094 IPR034003 -
Tpr7g4883 1461 SMART AAA_5 896 1088 IPR003593 -
Tpr7g4883 1461 SMART AAA_5 189 414 IPR003593 -
Tpr7g4883 1461 Pfam ABC transporter 887 1039 IPR003439 GO:0005524
Tpr7g4883 1461 Pfam ABC transporter 180 362 IPR003439 GO:0005524
Tpr7g4883 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 859 1112 IPR003439 GO:0005524
Tpr7g4883 1461 Gene3D - 873 1106 IPR027417 -
Tpr7g4883 1461 Gene3D - 165 469 IPR027417 -
Tpr7g4883 1461 CDD ABCG_PDR_domain1 173 419 IPR034001 -
Tpr7g4883 1461 Pfam ABC-transporter N-terminal 90 155 IPR029481 -
Tpr7g4883 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 164 437 IPR003439 GO:0005524
Tpr7g4883 1461 Pfam ABC-2 type transporter 1185 1398 IPR013525 GO:0016020|GO:0140359
Tpr7g4883 1461 Pfam ABC-2 type transporter 516 727 IPR013525 GO:0016020|GO:0140359
Tpr7g4883 1461 Pfam ABC-2 type transporter 395 473 IPR043926 GO:0140359
Tpr7g4883 1461 Pfam ABC-2 type transporter 1068 1129 IPR043926 GO:0140359
Tpr7g4883 1461 MobiDBLite consensus disorder prediction 804 827 - -
Tpr7g4883 1461 Pfam Plant PDR ABC transporter associated 733 796 IPR013581 -
Tpr7g4883 1461 MobiDBLite consensus disorder prediction 804 829 - -
Tpr7g4883 1461 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1461 - -
Tpr7g4883 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 880 1096 IPR027417 -
Tpr7g4883 1461 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4883 Tpr-Chr7 56800995 56814388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4883 K08711 - gmx:100801386 2476.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4883 7 56800995 56814388 Tpr7g4883 7 56800995 56814388 ECH
Tpr7g4883 7 56800995 56814388 Tpr5g2491 5 46600615 46613042 PCT