Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4654 ATGGAAGACCCTCTTGGTTCCATATTCAGTTATGAAGAAAGTCCTGATCAATTGAGGCAAAAGCTTATAGACACAATGGTTGAACTAGAAGAAGCAAGGAATGTGAAGAATGAATTGCTCAACATGATTGAAATAGCTAATAAAGAAAGAGACCAAGCTAGAGAACAACTTCAAAATCTAAAGAAAAAATTTGTCCCTTCTAACAACACAAACATGTTTTTTGACAACAACATTAACAACAACCTTGTAATGTTTCATTCGACCAAAGCAAATTCAAGCATAACAGAATCCAACAGTCCTTCACACGTGTCATCTCCAATTGAAGCTGTTTCATCACCTGAGTTTTCAAATGTTGGTGTTGATTCACATAACAACATGAGTTTTTTCAAAGGGTCAATTAGTAACAAGTTTGATCCAGTTAATGATATTGGAAATGCTGTTATTGATTCTCTTGTTAGTGGAAAAGTGTTACCACAAAAGGGTAAACTTCTTGATGCTGTTATGAATGCTGGTCCTTTAATTCAGAATCTTGTTCTTTCTGGTCCACTTCCTAATTGGAAAAATCCACCTCCTTTGGATTCAATGCAAATTCCACCTTTTGATATTAAAGAAATTGATGAGCTCAACTTGTTTCGGAATTCAACACTTCCATCTTCTCACTCTTTTGGATCAATGCCAATTATCAATGTTGATGGTGTCACACCTAGCTCTTGCAACAACAATACTTGGAAGTCTACTTCAAATTCTAGCTTCAAGAAACAAAAGCATCAATATTTTTTATGA 783 0.3474 MEDPLGSIFSYEESPDQLRQKLIDTMVELEEARNVKNELLNMIEIANKERDQAREQLQNLKKKFVPSNNTNMFFDNNINNNLVMFHSTKANSSITESNSPSHVSSPIEAVSSPEFSNVGVDSHNNMSFFKGSISNKFDPVNDIGNAVIDSLVSGKVLPQKGKLLDAVMNAGPLIQNLVLSGPLPNWKNPPPLDSMQIPPFDIKEIDELNLFRNSTLPSSHSFGSMPIINVDGVTPSSCNNNTWKSTSNSSFKKQKHQYFL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4654 260 Pfam Protein of unknown function (DUF1635) 14 256 IPR012862 -
Tpr7g4654 260 Coils Coil 29 63 - -
Tpr7g4654 260 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 254 IPR012862 -
Tpr7g4654 260 PANTHER HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4654 Tpr-Chr7 54941222 54943327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4654 - - mtr:MTR_2g096360 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4654 7 54941222 54943327 Tpr7g4654 7 54941222 54943327 ECH
Tpr7g4654 7 54941222 54943327 Tpr3g2024 3 18459987 18462567 PCT