Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4603 ATGGTAAATAGTACTCGTGCTAGTCAAAAGGCTAAGGATGAAGAAAATGTGAGGGTGACTCGAAGTAGAGAGAAAGCAAAAATTAATGGACATCCTAATTTATTGGATACAGATAGTACTAGAAAGTCTACTAGAGAAACACCTTTAAGGAAGACAAATGCAAGCTCTTCCAGTACTCAGAAGTCCGAGCAAGTAGAGAAGGCAACACTGCCAGCTCCTGAAGCTAGAAGGAAGTCTGAAAGGGTTGAGAAAAAGAAGACGCCGAGTCCTTTGACAAAATCTGGAAAAACTAGGAATCCTTCTTCTTCTTCTAGTCCTTCAGATTCTAAAAGTGCAGGGTCTTTGGGTTCAATTTCAAGGCAGAAGCTACAAAAAGAGAAGAGTGTGAAGCAGTTGGCATTTGAAGCCCCAGAAGTGACTGAAAATGAGGAACACAACGTGGGAACTTCCCAGGTGAAAATAAAGAGAATGGACGCCCGTATGTATCGGTCTCTCTTTAAAGATGGAAAGAAAGGTACTATAAAGAAGTTATCTATAGGAAATTGCTCAGATAATAAAGAAGTCTCAAAGAATGGTACACTGCCATCTGAAGATGCCAAAGCAAAAGAGACTAGAGTAGACTCGAGTATTGACGAGCAAAAGTGCCAAAGCAAAGGTGACAACTGCAGTGGAGCCAAGATTGATGAGTTATCTAAAGGAAGTTGTTCAGATATTAACGAAGTCTCAAAGCATGGTACACTGCCATCTGAAGATGACAAAGCAAACGAAACAAGAGTTGATTCTAGGTTGAGTGGCCCTATGACAAATCTAGCAGAAAATAATGTGACTCCCGGTTCATTTATACCGTCTAACACCCCAAATTATGAGACTAGTGTGGTACCCATAAGGGTACAGTCTGATTGCTGCAGAGATGAGACATTACCAACATTAGCGTCAGGAAATTCTATATTAGACGATGATGACATGGTCAGTAACAATGCTGGGCTTGGTGGGGGTGAAAACTTGGCACCTTCTAAGAGAAAAGTAATCACAGTGGACACAGAATCAAATGTTTCTTCCACAATATCTAAAGGAGACAATGCGAACTTGATCCCTGATGCTCTCCCTTCCAAGTTAGGTGGAAACGAGTCATGTTCCAAACGAACAAGGTTAGATTATAATCCTACAGTCAAGGAGTCGTGCGATCCATGTGCAGCTGAGGACGAAGATGACACTGAACCAACCATGGTGCAGAAGGATAAGAGTGACTACACAAGTGGAATTGGACACCTGAAGGATAGCGCTGTGGAAGACAAAAATGTTCTGGCTCTTGATGGTCAAAATGATAATGAAAAAGATAGTTTAATATATAGTTCCAATGAAAGTGTTGTTCAGCCGAAGGAGAAATTGTCAAGTCATATTGCAAACAGATGCAAGTCTGACTCCTATAGGTTTGTTGAGTATTGGGTTCCTGCACAGATATCTCACGTGCAGCTTGAGCAATATTGTGCTACTTTACTTTCAAATTCTTCAATTCTTTGCTCGTCACCCAAGATTGATTGTGTTGGGGCCATTCGTGATGTCCTTATTTCTATCCGGAAGTGTTGTAATCATCCCTATGTTAATGATCCGTCCGTGCAAACTTTACTATTCAAGGACCTTGAAGAAGTTGATTATCCGAGTGACAAAGAAAAATTAGTTGAGTATCTAAATGTTGGAATAAAAGCAAGTGGCAAGCTGCAACTACTTGATTCAATGCTCACAGAGTTGAGAAAAAATAACTTACGGGCACTCGTGCTTTTCCAGTCTATTGGAAAGGATTCAATTGGAGATATTTTAGATGACTTCCTGCGACAAAGATTTGATGTAGATTCATTTGAAAGAATTGATAAAAGTCTTTCATCTTCTAAGAAGCAAGCTGCCATTAAGAAATTTAATGACAAGAATAATAAGCGATTTGTCTTTCTGATGGAAACTAGTGCCTGCCTTCCTAGCATAAAATTGTCATCAATTGACACTGTTATTATATTTGATAGTGATTGGAACCCAATGAATGATCTAAGATCCCTTCAGAAGATAACACTTGATTCACAGTTTCAATTTATCAAAATGTTCCGTTTATATACAGCTTTCACTGCTGAAGAGAAAGCTTTAATTCTTGCTACGCAAGATAAGGCCCTAGACATAAACTGTCTATATTCAAGCCGGGGTCTCAATCATACTCTCTTGATGTGGGGTGCTTCTCGTCTTTTTGACGAGTTGGGGGTTTCCCTTGACGGTTCAACTTCTACGTCAAGTCCTATACCACTGCTAGAAAAAACCGTTTCAGAGTTCACATCCTGTCTATCTGATGCTGGTGAAGATTCGGACACGAGCAGTCGCTCAATTTTATTGAAAGTCCAGCAAAACGGAGGATCCTACTGTTCCAATTTTCCTTTGCTTGGTGAACTGAAACTTGGGTCGCTGGATGAAGAGTCACCACAAACTTTTTGGACTAAACTATTGGAGGGAAAACATTTTCGATGGAAGTACTCAAGTAGTCCATCTCAGCGGAGCCGGAAGAGAGTTCATTGTTTCAATAATTTGGAAGGTGGGACCAACCCTGTGAATGAAGGCATAACAAAGAAGCGCATGAAAGTGAGCAACAATACTGTTGATCAGCCTACATCGAAATCTGAAGGTGAAAAGTTACCCACTGGAGTCAAGGCAGATAAACCTCAGGATAATGGTGTTGGATCCGAGAAAAACGGCAGAATACATGATGAGCAGAGGAGCTTACATCTTTTGCTGAAGCCACAGATCACAAAGCTCTGTGACGTTCTTCTTCTTCCAGATAATGTCAAGAATATGGTTGACAATTTTCTTGAGTATGTTATGAACCATCACCATGTCGATAGGGAACCCGTGTCAATATTACAGGCTTTTCAAATATCTCTGATTTGGACTGCTGCTTCTTTGCTAAATCACAAACTTGACCACAAGGCTTCTCTTATTCTTGCGGAACAAAATTTGAATTTTGACTGTAAGAAAGGAGAGGTGGACCTCATTTTTTCTATGCTGCGGTGTCTAAAGAAAATATTTTTACATCGTACAGAAAATTGTAATAATACTTCTTCTCCAAAAGCTTCTAAATCACCAAGAGTTTCATGTACTGGAGTGGCACAAGAGGTTGAATTGTTCAAAAAAGATTTGTCCAAAAGCATTAAAAAAATTCAGAAAAAGTGTGAAAAAACGCTGAATAAGATACGCCTTATGCACCAGGAAGAGAAACAAAGGTTGAGAGCGTCTAATGAGGCTCAAAAGGCTGAATTGGAGAGAAAATACACAATAGAGTTAGCATTCACGCGATCCTGCTCTCCTAATGAGGTGACGAGAATAGAAATGCTCAAAATTTTGAATATTGAACATCAAAAAAGGATTGAAGATCTGGAATTTCAGTATGAAACAAGTCTCAAAGATCTCGAGGACAAACATTCAGCTCATATATTAAAGGTTCAAGACTGTGAGACCACTTGGGTGGAAGATTTGAAATCTTGGGCAAAAAACGAATTGCGAAACATAGTTGCTTTAAAGGAACTTGGGACTGGGTTTGATTACTCGCAGATGTGTGATAATGTGGCTGAATCCATGAAAGAGACTGGGGCTGTGGTTCCTCAAAAAAATTCCCCTTCAGTTGATAAAACAGTTGAACAACAAAATTCTCTGGTCAAGCATGACAGGGCTAATGAAATGGACATTATGGTTTCAAATGATCGGGCAGTCTCTGGAAATGAGGACCATAATACAACTGAAAATCAACATGTCAGTCAGGAAAATATTCTCTCTAAACTTTCCCATTCCAGAGAGCAGAATTCTGATGGTGCTACAAGCATGACAGATGAAGCTATTAGGTCTGAAAATTTTGGCCATGAGTCTAGAGATGGTTGTGAGAAGCCTAGTTTAGATACCGCGTGCTTGCCAGATTGCAGAGAACAGAATTCTGATTGTGCTACAAGCATGACAGATGAAGATAATAGGTGTGCAAATTTTGGCCATCGGTCTCGAGATGGTTGTGAGATTCCTAGTTTAGGTACCGCATGCTTGCCAGATTGTGAGAATGCCACACATCCAGTGCACCAGTGTTCTGATGGAGTCTCATCAAGCGTACCTGAAGGGCAAATTCCAGGTGAAGTGCAAGAAACTACTAATGGAGGGGACTCTGTAAGTGTATCAGAAAGACAGGTACATGTTGAAATGTCTGAGGCCGTCAATTTCACTGATTGTCTGCTGCAGAGTCCCCCTTCATATGTGGCTCAAATATCCGACAGAGGTTCAATAGATGTGCCAGTTATAGATGGTGTTTCATCACCAAGGCCTTGTCAAGCTGCTTGTTCAACCAGTTGTCGAGATACAATTTCCCTTTCAAATCCACCTTTGGAGCAACAAATACCTGATGGACTCTTGAGTATTCCTGATGGAGATATTCCTGTCACTGTGCCAGAAAATAGTCATGCAGTGGCAGATTGTCATAAGGATATAGAGCCTTCAACAAATGCTGTGCTGGTGGATAATAGTACCACAAATGACCTGGAGGGAGGAGTACTCGGAACTGTGACCAGTGCTCCAGTATCTTCTAGACCAGTTAATGTCATGGAGCCTCTAGAACAAGGGCAACAATTGCCGTCTGTGGAGTCTGCTGCTGACAAGGATTCAGCTGGGGAAATGCAAAATTCTTATGAACAAGTTCAACTGGCATCTCGTTCAGCTGATGTTGTACCAGCCAATCAAATCACGGTGCCTCCAAAGCAGGTGCATCAATTAGCTGCTGCAGAGCTCTCTTCCAACTTGGGTATGCTGGGTTTGTCTAATTTTCATTTAGCAACTGAAGATGAACATCAGCCGAGCAATGTACCAGATATCCCCACTCATCATCCTGAACCATCTTCTGCGGTTCCAAATAAAAATGTTGCGCAGCCACACTCAAATTCGGCACTTTTTTTACATTCAAATCAAGCTGCCGTGCACCCTGTCTCAAATTCAGATCTTGATTCAGTTACAGCCAGTAGAGTTAGAACACAGTCTGCCAACCCAAGAAATTTGTCAACTCCTTTGGAGATGAATAATCACCCTATCCAATCTACAGCCCCTTCGTCTTCCACAAGGCTTCCACATTTGTCCTATGATCCACTGAAAATTGAATTTGAAAAAATACAAAAAGCAATAGAACAAACTTCGAAAAGCCATGAAGATTCGAAATTGCGGTTGAAATCTGATTTTGAAAAGGAATTAGCGGAGCTTCGAAAAAAGTATGATGTTAAATTTCAAGAGATGGAAGTTGAATTTCAGCGAACAAAGAAGACTTTGGATACAAATCTTAACACAGTTTGTGTGAATAAGTTATTGGCTGATGCTTTTAGGTCTAAATGCTTGGATCTTAAAGCACCCAGTGCTTCAGGAATGCAACATGATTCACTTCCGCGGCAGTTGCATCTACGTTCGAGTCAACAAACTGCTACTCGGTCATTAGTGGTTTCTGGTTCTTCCGGTCAGCCTCCTGCGACCAGTCTGCTGAGTCCCTCCATTGCTCCCAGTCAGCCTCCTGCAACCAGTCTGCTGAGTCCCCCCATTGCTCCTAAGTCACAGCATATGGTACCGCCTGGTTACAATAAGTCTGGAACTTCCTCCGGTGTCTCTGCAAGACCACCTCTCATTAACACTACTAGGTCTTCAATCGCCCGAGATGTTCAAACTGGTGGCGAGATACGTGCCCCTGCACCACATCTCCAATCTTCTAGACCCCCAAATTCTGTTCCACCCTCCAGTTTCCATCCTCTTCTACTCCGAAATCTAAGTCAGACAGCTCCTAGTAACCTTCGAGCAACTTCTCCCTCACACGCTCGTGTCCCACCCTTGCAAAGACCAACAGCCCATCAGTCTAATCCACAAACGGGATACCGGCCTGACAGTGCAGGCAGATTAGCCACTCCTAACTTACCTCTCACGGGTTCACATGGGAATGTTAGCAATCAATCTAATATAACCTCCCCAAATGTTATTTCGCGTTTGTCAGATACGGCTCCCGCTAACCTGTCCAGATTTGGGCCCAATAGCAGTAGCATGGTGGTTAACTCATCGCATCAAGCTGCGTCTGCAGATTTAGTATGTTTATCAGATGATGATGACTGA 6144 0.4175 MVNSTRASQKAKDEENVRVTRSREKAKINGHPNLLDTDSTRKSTRETPLRKTNASSSSTQKSEQVEKATLPAPEARRKSERVEKKKTPSPLTKSGKTRNPSSSSSPSDSKSAGSLGSISRQKLQKEKSVKQLAFEAPEVTENEEHNVGTSQVKIKRMDARMYRSLFKDGKKGTIKKLSIGNCSDNKEVSKNGTLPSEDAKAKETRVDSSIDEQKCQSKGDNCSGAKIDELSKGSCSDINEVSKHGTLPSEDDKANETRVDSRLSGPMTNLAENNVTPGSFIPSNTPNYETSVVPIRVQSDCCRDETLPTLASGNSILDDDDMVSNNAGLGGGENLAPSKRKVITVDTESNVSSTISKGDNANLIPDALPSKLGGNESCSKRTRLDYNPTVKESCDPCAAEDEDDTEPTMVQKDKSDYTSGIGHLKDSAVEDKNVLALDGQNDNEKDSLIYSSNESVVQPKEKLSSHIANRCKSDSYRFVEYWVPAQISHVQLEQYCATLLSNSSILCSSPKIDCVGAIRDVLISIRKCCNHPYVNDPSVQTLLFKDLEEVDYPSDKEKLVEYLNVGIKASGKLQLLDSMLTELRKNNLRALVLFQSIGKDSIGDILDDFLRQRFDVDSFERIDKSLSSSKKQAAIKKFNDKNNKRFVFLMETSACLPSIKLSSIDTVIIFDSDWNPMNDLRSLQKITLDSQFQFIKMFRLYTAFTAEEKALILATQDKALDINCLYSSRGLNHTLLMWGASRLFDELGVSLDGSTSTSSPIPLLEKTVSEFTSCLSDAGEDSDTSSRSILLKVQQNGGSYCSNFPLLGELKLGSLDEESPQTFWTKLLEGKHFRWKYSSSPSQRSRKRVHCFNNLEGGTNPVNEGITKKRMKVSNNTVDQPTSKSEGEKLPTGVKADKPQDNGVGSEKNGRIHDEQRSLHLLLKPQITKLCDVLLLPDNVKNMVDNFLEYVMNHHHVDREPVSILQAFQISLIWTAASLLNHKLDHKASLILAEQNLNFDCKKGEVDLIFSMLRCLKKIFLHRTENCNNTSSPKASKSPRVSCTGVAQEVELFKKDLSKSIKKIQKKCEKTLNKIRLMHQEEKQRLRASNEAQKAELERKYTIELAFTRSCSPNEVTRIEMLKILNIEHQKRIEDLEFQYETSLKDLEDKHSAHILKVQDCETTWVEDLKSWAKNELRNIVALKELGTGFDYSQMCDNVAESMKETGAVVPQKNSPSVDKTVEQQNSLVKHDRANEMDIMVSNDRAVSGNEDHNTTENQHVSQENILSKLSHSREQNSDGATSMTDEAIRSENFGHESRDGCEKPSLDTACLPDCREQNSDCATSMTDEDNRCANFGHRSRDGCEIPSLGTACLPDCENATHPVHQCSDGVSSSVPEGQIPGEVQETTNGGDSVSVSERQVHVEMSEAVNFTDCLLQSPPSYVAQISDRGSIDVPVIDGVSSPRPCQAACSTSCRDTISLSNPPLEQQIPDGLLSIPDGDIPVTVPENSHAVADCHKDIEPSTNAVLVDNSTTNDLEGGVLGTVTSAPVSSRPVNVMEPLEQGQQLPSVESAADKDSAGEMQNSYEQVQLASRSADVVPANQITVPPKQVHQLAAAELSSNLGMLGLSNFHLATEDEHQPSNVPDIPTHHPEPSSAVPNKNVAQPHSNSALFLHSNQAAVHPVSNSDLDSVTASRVRTQSANPRNLSTPLEMNNHPIQSTAPSSSTRLPHLSYDPLKIEFEKIQKAIEQTSKSHEDSKLRLKSDFEKELAELRKKYDVKFQEMEVEFQRTKKTLDTNLNTVCVNKLLADAFRSKCLDLKAPSASGMQHDSLPRQLHLRSSQQTATRSLVVSGSSGQPPATSLLSPSIAPSQPPATSLLSPPIAPKSQHMVPPGYNKSGTSSGVSARPPLINTTRSSIARDVQTGGEIRAPAPHLQSSRPPNSVPPSSFHPLLLRNLSQTAPSNLRATSPSHARVPPLQRPTAHQSNPQTGYRPDSAGRLATPNLPLTGSHGNVSNQSNITSPNVISRLSDTAPANLSRFGPNSSSMVVNSSHQAASADLVCLSDDDD* 2048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4603 2047 CDD SF2_C_SNF 570 680 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1942 1973 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1663 1707 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 244 259 - -
Tpr7g4603 2047 PANTHER HELICASE PROTEIN MOM1 7 1426 - -
Tpr7g4603 2047 PANTHER HELICASE PROTEIN MOM1 1443 2046 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 49 66 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1876 1896 - -
Tpr7g4603 2047 Pfam Helicase conserved C-terminal domain 572 678 IPR001650 -
Tpr7g4603 2047 Gene3D - 451 477 IPR038718 -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 261 276 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1803 1856 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 890 911 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 243 276 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 872 887 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 176 223 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 8 31 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 92 122 - -
Tpr7g4603 2047 Coils Coil 1742 1762 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 123 158 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1 158 - -
Tpr7g4603 2047 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 575 736 IPR001650 -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1807 1853 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 70 90 - -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 872 911 - -
Tpr7g4603 2047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 716 IPR027417 -
Tpr7g4603 2047 PANTHER HELICASE PROTEIN MOM1 7 1426 IPR039322 GO:0031507
Tpr7g4603 2047 PANTHER HELICASE PROTEIN MOM1 1443 2046 IPR039322 GO:0031507
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 1538 1564 - -
Tpr7g4603 2047 Gene3D - 478 721 IPR027417 -
Tpr7g4603 2047 MobiDBLite consensus disorder prediction 191 214 - -
Tpr7g4603 2047 Coils Coil 1054 1100 - -
Tpr7g4603 2047 Gene3D - 1713 1794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4603 Tpr-Chr7 54461851 54476319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4603 - K11642 mtr:MTR_2g095030 2457.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4603 7 54461851 54476319 Tpr4g1665 4 17147569 17159743 PCT