LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g4385	ATGAACCAATCTACCTCCGACGCTTCTTCAATCCAATTCAACTTACCACCACTCTCTTTAAGCCTCTTCGACGCAGAGCCATCCACACACGATCAACCAAACGGCGTCGTTCATGGATCTATTCCCAAACACTCCTCCGAACCTTCAACTCCTACCAGTAGCGGTTACGTTGCTGAAAGAGGTAGTAGCAGCACCGCCACAAGCATTTCTCATGAAATTGAGGAATTGAATATTCATGATCCTCCACCATCCGTTTCTAATGATTCCGATGCTTCCTTGTTACCTAGTCAAGGAAATCTCGATGAGGATGATGCTTCCATATCATGGAGGAAAAGAAAGAAGCATTTTTTTGTTCTGAGTCATTCCGGCAAACCAATATACTCTAGGTATGGAGATGAACACAAGCTTGCTGGGTTTTCAGCAACTTTGCAAGCAATCATTTCCTTCGTTGAGAATGGGAGTGACCGTGTCAAGTTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGTATCAGCTGCACAGAAGAGCCTTACGAATCACTAAGAGGGCAATTGGATCTCATTTATGGCCAGATGATCGTTATACTGACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACACTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAACCCAGCTACATTTCTTCATGCTTATACTTGTCTACCTCTTGCGTATGCAACAAGGCAAGCTGCTGGTGCCATCTTGCAAGACGTTGCTGATTCTGGTGTTCTGTTTGCAATACTGATGTGCAGACACAAGGTGATCAGTCTATTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTACTGGCCAACTTTGTTATGTCAACAGAGTCCTTTAGGACCTCGGAGGCATTTTCCCCTGTTTGCTTGCCAAGATACAATCCTTTAGCATTTTTGTATGCTTATATCCATTATTTTGACGATGACACATACTTGTTGTTGCTTACAACTAATTCTGATGCATTTCACCATCTCAAGGATTGCAGGATTCGTATCGAATCGGTCCTTTTGAAGTCAAATGTCCTTGGTGAAGTTCAAAGATCCTTGTTTGATGGAGGAATGCGTGTTGAGGATCTTCCGCCCTTATCTCATTCTGGATCATGTCACTTGGGCCAGCATAGGCTTCAACCAGATTATCCTGAAAGATTGCGAGAATCTAATTCTGGTGTTGCTGGTGTTGCTGGTTTGTGGCATTTCATATACCGCAGCACATATCTGGATCAGTATGTATCTTCAGAGTTCTCATCACCTATTAACACTCCTCAGAAGCAGAAAAGATTATTTAGAGCGTATCAGAAACTTTTTGCATCAATGCATGAGAAAGGAATTGGGCCACACAAAACTCAGTTTAAGAGGGATGAAAACTATGTTCTGCTCTGCTGGGTAACACAGGACTTCGAACTTTATGCTGCATTTGATCCTCTTGCAGAGAAGGCGTCCTCAATAAAGACATGCAACCGGGTATGTCAATGGGTAAAAGATGTCGAAAATGAAATATTTTTGCTAGGAGGTAGCCCCTTTTCATGGTGA	1638	0.428	MNQSTSDASSIQFNLPPLSLSLFDAEPSTHDQPNGVVHGSIPKHSSEPSTPTSSGYVAERGSSSTATSISHEIEELNIHDPPPSVSNDSDASLLPSQGNLDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGSDRVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLDLIYGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLFGAQKASLHPDDMLLLANFVMSTESFRTSEAFSPVCLPRYNPLAFLYAYIHYFDDDTYLLLLTTNSDAFHHLKDCRIRIESVLLKSNVLGEVQRSLFDGGMRVEDLPPLSHSGSCHLGQHRLQPDYPERLRESNSGVAGVAGLWHFIYRSTYLDQYVSSEFSSPINTPQKQKRLFRAYQKLFASMHEKGIGPHKTQFKRDENYVLLCWVTQDFELYAAFDPLAEKASSIKTCNRVCQWVKDVENEIFLLGGSPFSW*	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g4385	545	Pfam	First Longin domain of FUZ, MON1 and HPS1	114	235	IPR043972	GO:0016192
	Tpr7g4385	545	PANTHER	SAND PROTEIN-RELATED	45	545	IPR004353	GO:0006623
	Tpr7g4385	545	Pfam	Second Longin domain of FUZ, MON1 and HPS1	275	366	IPR043971	GO:0016192
	Tpr7g4385	545	MobiDBLite	consensus disorder prediction	43	68	-	-
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	114	131	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	132	152	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	166	180	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	217	229	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	246	267	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	270	283	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	294	310	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	319	342	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	347	373	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	494	508	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	510	523	IPR004353	GO:0006623
	Tpr7g4385	545	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	523	543	IPR004353	GO:0006623
	Tpr7g4385	545	PANTHER	BNAC04G15860D PROTEIN	45	545	-	-
	Tpr7g4385	545	MobiDBLite	consensus disorder prediction	22	68	-	-
	Tpr7g4385	545	Pfam	Third Longin domain of FUZ, MON1 and HPS1	431	531	IPR043970	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g4385	Tpr-Chr7	52611914	52618101	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g4385	K20195		-	gmx:100814534	888.641

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g4385	7	52611914	52618101	Tpr4g1689	4	17445019	17450655	PCT