Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4340 ATGTTAGTAAGAGATTTAATGGAAAAAAAGAAGTTAAACCTCAACCAGCCAATTTTATCAGTGAGGAGAGTCAGATCAACAATAGCTTCTGAATCGGACGATAAAAGGAAAAGCACTAATAATTCATTAGCAAGATTACCACCTTCAGGTCCAGTGAGAGTCGGCGCTATTCCTTTTCAATGGGAGAAAACTCCAGGAAAACCGAAAGATATATCGGTTATTGAAAACGGAATTGGAAACAATGTTTCCGGCTCTCAAAATGTTGTATCTTTTGATAAAAAGGTAATACTACATGAGAGCGGAAAAGAGGGAATCGAGGAGAAGGCAGGTTCTGATTCGGACGATGGAAATGAGAGTTTTAAAGATGCTCGTGACACTCTTTCGAGGACTGAATCATTCTTCATGAGCGGTAGAATGAGTGGTGTATATGATGATCATGAGGTACAAGTCCAACCAAAGGGAAGTTTCTTGAGCGATGAAAAGGCTCGAGATTTCATGATTGATCGGTTTTTGCCTGCTGCTAAGGCAATGATATCTGAAACACATCAATATGCTTCAAAGAAGCCGATTGTTGGACAAGGACAACAAAAACAGTTATGGAAAATCGGGAGTACAGAAAATTCATCTCCTCTTAATCAACATCGACTGAAATCATTGCGGCATAAGGAAGGAGGCGTATTTGAAATCGATGATTCTGAAAACTATACTACGACTTGTGGACTATTTCCTCACTTCTGTCTTTTGAATCCAATGCCAGCAGAAAGAATGGAGAATGAGCACAGTGCTACTAGACCTCCTTATCAAAGGGGTTGCGGCGAATCATTAGCCTGTGAGAGTCCCGCTGTTGAGAAAACTGTATATGTTGATTCTGTGCACAAGATCAAGTTTCAAACCAATCAGAAAGGCGACAATTTTGAGGCTTTGAAAAGTGATAGTGACATTAACAAGAATCTTTCGGTAGATTCTTTGCTCGAAAATCGCCAATGGTTGGATGATGTAAATATGAAGGCAGCATTAGAAGCCAAAATTCTGCAGTCTGTTGATTCGCCTTTCCTCATTTGTTCTGAAGATCCTAGCAATGGTATGCAAATGGAAACGACAAATTATTCGAAGAAAATGGACTCGGAATTAGGAAAGCTTGGCAACCAAGGAAACAACTTGGAGCAGAACACGGTGTTGATTTCAAGTCCAAAAATGGATTATGATGATAGCCTAATTAATAATTCTGAGGTTGATATTAAGAACCAACCAGCTGCCAAATTGATTGATACAGTCGAAGGTGAAGAGAAGATTGACTTAGAAAGGCAATGTGGTATATTAGGCCATCAGGAGCTATCTGATGCAACAAACTTTTTTGAGATTCCTCTTGTGCTTCCTTCGCTGAAAGCTCCGTCAGAATCTTGGCTTAAGCGTACTTTACCTGCCATTTCCACAAGGGACGCATCTTCAAAGTCTAAACCTTGCTGCAAATATTTGTACAAGACAACATCACTGTGTCTCAAGTGA 1506 0.3984 MLVRDLMEKKKLNLNQPILSVRRVRSTIASESDDKRKSTNNSLARLPPSGPVRVGAIPFQWEKTPGKPKDISVIENGIGNNVSGSQNVVSFDKKVILHESGKEGIEEKAGSDSDDGNESFKDARDTLSRTESFFMSGRMSGVYDDHEVQVQPKGSFLSDEKARDFMIDRFLPAAKAMISETHQYASKKPIVGQGQQKQLWKIGSTENSSPLNQHRLKSLRHKEGGVFEIDDSENYTTTCGLFPHFCLLNPMPAERMENEHSATRPPYQRGCGESLACESPAVEKTVYVDSVHKIKFQTNQKGDNFEALKSDSDINKNLSVDSLLENRQWLDDVNMKAALEAKILQSVDSPFLICSEDPSNGMQMETTNYSKKMDSELGKLGNQGNNLEQNTVLISSPKMDYDDSLINNSEVDIKNQPAAKLIDTVEGEEKIDLERQCGILGHQELSDATNFFEIPLVLPSLKAPSESWLKRTLPAISTRDASSKSKPCCKYLYKTTSLCLK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4340 501 MobiDBLite consensus disorder prediction 27 48 - -
Tpr7g4340 501 Pfam Protein of unknown function (DUF688) 7 261 IPR007789 -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 7 73 - -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 78 262 - -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 276 489 - -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 78 262 - -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 276 489 - -
Tpr7g4340 501 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 7 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4340 Tpr-Chr7 52133776 52135860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4340 - - cam:101509654 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4340 7 52133776 52135860 Tpr7g4340 7 52133776 52135860 ECH
Tpr7g4340 7 52133776 52135860 Tpr7g4340 7 52133776 52135860 PCT
Tpr7g4340 7 52133776 52135860 Tpr7g4313 7 51918227 51921760 PCT