Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4256 ATGTTTGCAGGAAATGGGTTGTTTTATCCCATTTTGGGTTTTGCTTCATTTGTTGTTTTTATTTATATGTCATTTGGAGGGTTAAGGTTTAGTCTTGATGAAGGGAGAGAAATGGGTTTTGTGATGAGAAATGAGACACAATTTGTGGTTGATGGAAAACCGTTTTATGTTAATGGGTGGAATTCTTATTGGATGATGGATCATTCTGTGGATTTTTCGTCGAGATTTAAGGTTCGTGAAATGATGAAAATTGGTGCTAAAATGGGGCTCACTGTTTGTAGAACTTGGGCTTTCAATGATGGTCATTATAATGCTCTTCAAATTTCACCTGGTCAATTTGATGAACAAGTTTTTCAGGCTTTAGATTATGTGATAGCAGAAGCAAAGCAAAATGGAATTAGGCTGCTCCTTAGCTTAGTAAATAACTTGCAACCATATGGTGGGAAGAGTATGTATGTCAAATGGGCGTGGCAAGACGGGGTAGGAGTAAGCCCCTCCAATGATTCTTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTGTCTTGACAAGGAAAAATACTATCACCGGAATTGAATATAGAAACGACCCCGCCATTTTTGGCTGGGAATTGATTAATGAGCCTCGTTGCATGACTGATCGTTCTGGCGACACTCTCCAAGAGTGGATAGAAGAAATGTCGGCCTTTGTGAAATTGATTGACAAGAAACATCTGCTGACTGTGGGGAATGAAGGTTTTTATGGTCCCAATGACCCAAAAGATTTGACTGTCAACCCCAATTACTGGGCATCCAAACTAGGGTCTGACTATATCCGGAACTCCAAAGTCTCTAATATTGACTTCACCTCTGTTCATATCTACCCTGACCAATGGTTTCATGAGGATGAGAGAGCAATTGATACTCAACTGAAATTTATCTCCAAGTGGATGCTTTCCCACATTGAAGATGGCGACCAAGTATTAAAGAAGCCAGTCTTGTTCTCCGAATACGGTTTATCAAAAAAGAACCAGGACTTCACTCTATCGGCCCGAGCAAATATGTACGATACAATTTTAAACATCGTTTACAAATCTGCAAAGAGAAACAGGTCCGGAGCAGGTTCTCTAGTTTGGCAATTCTTAGCTAGCGGAATGGAAGATTATTCTGATGATTATGCGATAGTTCCGTCGGAAAGTCCATCAATACAGTCACTCTTTATTAAACATTCATGCAAATTGGCCAAACTCAAGGGATGGACTCAAAAGGATGTAAATTTCAAAGCGCTTTGTTAG 1290 0.3946 MFAGNGLFYPILGFASFVVFIYMSFGGLRFSLDEGREMGFVMRNETQFVVDGKPFYVNGWNSYWMMDHSVDFSSRFKVREMMKIGAKMGLTVCRTWAFNDGHYNALQISPGQFDEQVFQALDYVIAEAKQNGIRLLLSLVNNLQPYGGKSMYVKWAWQDGVGVSPSNDSFFYDPSIRSYFKNYIKTVLTRKNTITGIEYRNDPAIFGWELINEPRCMTDRSGDTLQEWIEEMSAFVKLIDKKHLLTVGNEGFYGPNDPKDLTVNPNYWASKLGSDYIRNSKVSNIDFTSVHIYPDQWFHEDERAIDTQLKFISKWMLSHIEDGDQVLKKPVLFSEYGLSKKNQDFTLSARANMYDTILNIVYKSAKRNRSGAGSLVWQFLASGMEDYSDDYAIVPSESPSIQSLFIKHSCKLAKLKGWTQKDVNFKALC* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4256 429 Gene3D Glycosidases 36 416 - -
Tpr7g4256 429 Pfam Cellulase (glycosyl hydrolase family 5) 51 378 IPR001547 GO:0004553|GO:0071704
Tpr7g4256 429 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 429 - -
Tpr7g4256 429 PANTHER - 4 429 IPR045053 GO:0004553
Tpr7g4256 429 SUPERFAMILY (Trans)glycosidases 39 394 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4256 Tpr-Chr7 51513180 51518971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4256 3 429 Glycoside Hydrolase AT2G20680 66.745 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4256 K19355 - gmx:100783510 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4256 7 51513180 51518971 Tpr7g4256 7 51513180 51518971 ECH