Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4241 ATGGAAAACATCCAACACAGTAATGTAGAAGTGAAAGGACTAAAGCTGCATGTAGCTGAGATTGGAACTGGTGATAAGGTAGTGGTTTTCTTACATGGATTCCCAGAAATATGGTATACATGGAGACACCAAATGATTGCTGTTGCAAATGCTGGTTACCGTGCTATTGCCTTTGATTTTAGAGGCTATGGACTTTCTGATCATCCAGCAGAACCAGAGAAAGCAAATTTAATGGACCTTGTTCATGAAGTCAAGGATCTTTTAGATTCACTAGGTATCAGCAAGGCTTTCCTTATTGGTAAGGACTTTGGTGCCCTCCCAGCATATCTTGTAGCTGCTGTCTATCCTGAAAAAGTAGCTTCAGTCATTACTTTAGGTATTCCTTTCATGCTTCCTGGTCCTTCTGTTGTCCAGAACCATCTTCTTCCAAAAGGCTTCTACATTACTAGGTGGCAGGAACCTGGGAGGGCAGAAGCAGATTTTGGCCGATTTGATGTTAAGTCGGTTATAAGGAACATTTATATTCTGTTTTCGAAAAGTGAGATTCCAGTAGCAGGTGATGATCAAGAAATCATGGACTTGTTTAATCCATCTACTCCTCTCCCATCATGGTTCTCTGAGGAAGACTTGACAGTTTATGCATCACTATATGAAAAATCTGGCTTCAGATTTGCATTGCAGGTTCCATACAGGTCTGTGACAGTGGAAAGTGGTCTAACTGATCCTAAAATCAATGTTCCTGCACTACTGATAATGGGTGAGGAAGACTATTTCTTCAAGTTTCCTGGCATGGAAGACTACATCAGAAGTGGAGTGGTGAAAAATTTTGTGCCAGACTTGGAAACTATATATATTCCAGAAGGAAGCCATTTTGTTCATGAACAATTCCCAGAAAAAGTGAACAAGATCATCATTGAGTTCCTTGACAAACAAACTATCTGA 942 0.4023 MENIQHSNVEVKGLKLHVAEIGTGDKVVVFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSDHPAEPEKANLMDLVHEVKDLLDSLGISKAFLIGKDFGALPAYLVAAVYPEKVASVITLGIPFMLPGPSVVQNHLLPKGFYITRWQEPGRAEADFGRFDVKSVIRNIYILFSKSEIPVAGDDQEIMDLFNPSTPLPSWFSEEDLTVYASLYEKSGFRFALQVPYRSVTVESGLTDPKINVPALLIMGEEDYFFKFPGMEDYIRSGVVKNFVPDLETIYIPEGSHFVHEQFPEKVNKIIIEFLDKQTI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4241 313 Pfam alpha/beta hydrolase fold 26 136 IPR000073 -
Tpr7g4241 313 PANTHER EPOXIDE HYDROLASE-LIKE PROTEIN 3 311 - -
Tpr7g4241 313 PANTHER EPOXIDE HYDROLASE 3 311 - -
Tpr7g4241 313 SUPERFAMILY alpha/beta-Hydrolases 2 310 IPR029058 -
Tpr7g4241 313 Gene3D alpha/beta hydrolase 1 312 IPR029058 -
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 32 50 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 52 67 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 98 111 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 112 125 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 246 262 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Epoxide hydrolase signature 285 307 IPR000639 GO:0003824
Tpr7g4241 313 PRINTS Alpha/beta hydrolase fold signature 52 67 IPR000073 -
Tpr7g4241 313 PRINTS Alpha/beta hydrolase fold signature 98 111 IPR000073 -
Tpr7g4241 313 PRINTS Alpha/beta hydrolase fold signature 112 125 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4241 Tpr-Chr7 51376918 51379903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4241 1 310 Acyl Lipid Metabolism Gene Families AT4G02340 36.050 1.18e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4241 - - gmx:100811159 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4241 7 51376918 51379903 Tpr7g4241 7 51376918 51379903 ECH