Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4226 ATGGATGATGACGATGATTTCGCTCTCGCCGATTCTTTCATTAATTTCGATTATGCCGCCACCGCCGCCGCATATTCCCCCACCACCTCAGACAACAACAACAACAACCCTCCCGACCTACCTATCGTCGAGTCCGGGTCTTCTGATCTGGATCTTACCGTTGGAAATTCCGGTGTTCAGGAATTGTTTCAGAGTTTCTCTTTAGTTGAGAATGAGGTGAATGAAATTGAAAATGCTGAAAATAGAGGTGAGATTATTGGTAATGATGATAATGCTGTTGAAATTAGAAGCGACGTTATCGCTAATAATGATTATGTTAATGACATTGTTGAAATTAGAGACGAGAGCGAGATTATAACTAATGATAATGTTAATGAAATTGAAAGTGAAAGTACTACTGACTCTGAGAGTGAGAGTGAGAGTGAAAGTGAAGATGAGAATGAATTGGAAGAAGGCGAGATAGTAGATTCTGAAGTGAATGTTAATGATGATTCCGAGGAGATTACTAGCTGGGGCAGTGATGATTCTGACGATGATCAATCTCGAGGAAGATGCCATAGGTTAAGCAACGAGCTTGAGGATCTTCCTTGGATCCCTCCTGTGAATGTAAACTTGGGACCACATCATAAAATGCTACCAGTGGGAGTTGTTACATCGATTGTTGGTGCTAAAGTCATTGTGGAAGGGGTGGAGAAGCATGCTCCTCTTAATGAGGGTTCCATTCTCTGGATTACTGAAAGGCAAACCCCACTCGGTTTAATTGATGAGATCTTTGGACAAGTTACAAGTCCATATTATGTTGTGAGATACAATTCCAAAAATTATGTCCCGGAAGGGATCTGTAAGGGAACTTTGGTTTCTTTTGTTGCGGAATTTGTAAATCATGTGCTAGATGACAAAGATCTCTACGAGAAAGGATATGACGAGGGGTTGTCTGATGAAACAGAATTTTCGGATGATGAAAAAGAGGACGAATACAAGAAAAGGCAGAAACAAAATAAAAGAGCCACAAATAATCGAAATCCCAAGACAATGGTAAACAACAGGAAGAAATTTCCACCAAATAACGTTTCCGTCCCTACTATGCCTGTTGCACCTGCCACACCATTGGTTGCTCATGGTCATTGTCGTCCACCTATGCCAGGCACTGGACAAGACTTTTTTGGTGCTGCCCATGGTCATTCTTCATCACTTCCAAGCACCGGCCAAGGCTTTTCTGGTACACCTAATTTAAATCCACCATTTCCACCTGTAAATGGTGGTCCGAACTTGGTTACAACCGGTGTTTTGCCAAATGGGGTGCCACTTCCGCCTCAACAGTCTGTGATGCCTGCTAATGGATTTCCTACGAACGGTGTATCATGGCATCCAGAAAATACTCAATTTTCTCATCAGTTGCCCACACAAGGAATTCCATATCAACAGCAGTTCAATCCTAGCCACAGGTTTCCTCCACCAAATGCATATCCTGGAGGACAGCCCAATATGTATGCACACGGGCCAATGAACCAAAACCAACAGTCACCCTTTCCCCAGTTTCAGGCACCTACAAAATTTCATCCTAGCTCTATTCCATGCAATCAAGGTGGTCCTCCAAATCAATTCAATCCACCAACAAATTTTCATTCTAATTCTTTTCCAGGCAATCAAGGTGGTGCTCCAAATCAATTCAATCCACCAACAAATTTTTATTCTAATTCTTTTCCAGGCAATCAATGTGGTGCTCCAAATCAATTCAATCCACCAACAAATTTTCATTCTAGCTCTATTTCAAGAAATCAAGGTGGTCCTCCAAATCAATTCAATGCACCAACAAATTTTCATTCTAGCTCTATTTCAAGCAATCAAGGTGGTCCTCCAAATCAATTCAATCCACCAACAAATTTTCTTTCTAATTATTGTCCAGGCAATCAGCATCCTCCACAATCTAACCATCAATTCAATCCGGGTGCTTATGATGGCCGTGGAAGAACATTTTCTGCTGGCCGTGGGAGAAGACCATTCCATCGAGGGGGCAGAGGTTGGCGACCAGCCAGATAA 2040 0.4211 MDDDDDFALADSFINFDYAATAAAYSPTTSDNNNNNPPDLPIVESGSSDLDLTVGNSGVQELFQSFSLVENEVNEIENAENRGEIIGNDDNAVEIRSDVIANNDYVNDIVEIRDESEIITNDNVNEIESESTTDSESESESESEDENELEEGEIVDSEVNVNDDSEEITSWGSDDSDDDQSRGRCHRLSNELEDLPWIPPVNVNLGPHHKMLPVGVVTSIVGAKVIVEGVEKHAPLNEGSILWITERQTPLGLIDEIFGQVTSPYYVVRYNSKNYVPEGICKGTLVSFVAEFVNHVLDDKDLYEKGYDEGLSDETEFSDDEKEDEYKKRQKQNKRATNNRNPKTMVNNRKKFPPNNVSVPTMPVAPATPLVAHGHCRPPMPGTGQDFFGAAHGHSSSLPSTGQGFSGTPNLNPPFPPVNGGPNLVTTGVLPNGVPLPPQQSVMPANGFPTNGVSWHPENTQFSHQLPTQGIPYQQQFNPSHRFPPPNAYPGGQPNMYAHGPMNQNQQSPFPQFQAPTKFHPSSIPCNQGGPPNQFNPPTNFHSNSFPGNQGGAPNQFNPPTNFYSNSFPGNQCGAPNQFNPPTNFHSSSISRNQGGPPNQFNAPTNFHSSSISSNQGGPPNQFNPPTNFLSNYCPGNQHPPQSNHQFNPGAYDGRGRTFSAGRGRRPFHRGGRGWRPAR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4226 679 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 3 530 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Tpr7g4226 679 MobiDBLite consensus disorder prediction 637 679 - -
Tpr7g4226 679 MobiDBLite consensus disorder prediction 120 183 - -
Tpr7g4226 679 Pfam Gar1/Naf1 RNA binding region 212 274 IPR007504 GO:0001522|GO:0042254
Tpr7g4226 679 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 3 530 - -
Tpr7g4226 679 MobiDBLite consensus disorder prediction 129 174 - -
Tpr7g4226 679 MobiDBLite consensus disorder prediction 311 348 - -
Tpr7g4226 679 Gene3D Probable tRNA pseudouridine synthase domain 186 289 IPR038664 -
Tpr7g4226 679 MobiDBLite consensus disorder prediction 662 679 - -
Tpr7g4226 679 SUPERFAMILY Translation proteins 211 274 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4226 Tpr-Chr7 51244874 51247661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4226 K14763 - aprc:113855898 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4226 7 51244874 51247661 Tpr7g4226 7 51244874 51247661 ECH