Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4216 ATGGAAGTGGAGAGTGAAAAGCCAGGATCTGATGGAAAAGTTTGGAACTTTTGTAGAATGCCATTTTGGCAATCAAGTCATAATCCTTCATCATCTTCTACTACAACTACTACTACTACTTCATCTTCATCTTACATGCACAATGTTCATCATCAAAACCAGAGTCTTCATTCTATTGATAGATCTGTTCCTCAATCTTCAGCTACAGTTTCATCTGTGGCTAAGTCTTTGCTTCCTACTAGGAGAAGGCTTCGTCTGGATCCTCCTAACAAACTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGTGCAATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCTAAAAGTTGTTACATGCGCCCTCCTGGTGGTATTCTTTCACCTGGTGAAAGTGTAATTGCAACTGTATTCAAGTTTGTTGAGCCACCAGAGAACAATGAAAAGCCAACTGATCAAAAAAGCAAGGTTAAGTTCAAAATCATGAGCCTAAAAGTGCAAGGTGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGAGATCAAGTAGCTGTTGAGCAAATTCTTCGAGTTGTTTTTCTGGACCCTGACCGAAACAGTCCTGCCATGGATAAGTTGAAACGTCAGTTAGCTGAAGCGGAGGCTGCGTTGGAAGCTCGAAAGAAACCGCCAGAGGAGACCGGAGGTCCACGAGTAGCTGGGGAGGGACTTGTTATAGATGAATGGAAAGAAAGAAGGGAAAGATACTTGGCCAAGCAGCAGGTTGAAGGTGTTGTTGTTGATTCAGTGTAA 825 0.417 MEVESEKPGSDGKVWNFCRMPFWQSSHNPSSSSTTTTTTTSSSSYMHNVHHQNQSLHSIDRSVPQSSATVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPGGILSPGESVIATVFKFVEPPENNEKPTDQKSKVKFKIMSLKVQGEMDYVPELFDEQRDQVAVEQILRVVFLDPDRNSPAMDKLKRQLAEAEAALEARKKPPEETGGPRVAGEGLVIDEWKERRERYLAKQQVEGVVVDSV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4216 274 Pfam MSP (Major sperm protein) domain 84 194 IPR000535 -
Tpr7g4216 274 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 39 268 - -
Tpr7g4216 274 MobiDBLite consensus disorder prediction 226 245 - -
Tpr7g4216 274 Gene3D Immunoglobulins 79 209 IPR013783 -
Tpr7g4216 274 MobiDBLite consensus disorder prediction 26 56 - -
Tpr7g4216 274 ProSiteProfiles Major sperm protein (MSP) domain profile. 83 205 IPR000535 -
Tpr7g4216 274 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 39 268 IPR016763 GO:0005789
Tpr7g4216 274 SUPERFAMILY PapD-like 72 212 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4216 Tpr-Chr7 51166303 51170491 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4216 - - gmx:100820576 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4216 7 51166303 51170491 Tpr7g4216 7 51166303 51170491 ECH
Tpr7g4216 7 51166303 51170491 Tpr7g4216 7 51166303 51170491 PCT