Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4202 ATGGCTGCTCTAACTTCTCTGTCATTCTCAGCAACAACTCAATGCTCACAGAGAAAATCAACTCTACCTTCTTCTTCTACTCGTTTCCTTGCTTCCAGTTCTGATTTCTTTGGAATTAGGATAGATTCCTCATACTATCATCATGTTGGTGTTAGAGCTGCCAATTCTTCATCTAAAATGGTTATTCAATGCATGTCTTCTGTCACAGATGTTCCAAGTGTTTCCGAGACAAAGTTGAATTTCCTAAAGGCATATAAACGACCAATCCCAAGTATCTATAACAATGTGCTGCAGGAGCTCATTGTCCAGCATCATTTAATGAGATACAAGACATCATACCGTTATGATCCTGTATTTGCTCTTGGTTTTGTCACTGTTTATGATAAACTCATGGAAGGGTATTCTAGTGAAGAGGAACGAGATGTCATCTTCAAAGCTTATATTAATGCATTGAAGGAAGATCCGGAACAATACAGAATAGATGCACAGAAGTTGGAAGAGTGGGCTAGGACTCAAAACTCTACTTCCCTGGTTGAGTTTTCATCCAAAGAAGGAGAAATTGAAGGGATATTAAAGGATATTGCACAAAGAGCAGGAGGAAAGGGTGAATTCAGTTATAGTCGTTTCTTTGCAGTAGGACTTTTTCGCCTTCTTGAGTTGGCAAATGCGACAGAACCAACAATTTTAGACAAGCTTACTGCGGCTTTGAACATCGACAAAAAAAGCGTTGATCGGGACTTGGATGTGTATCGTATGCTTCTTTCCAAGCTGGTTCAAGCCAAAGAGCTGCTAAAGGAATATATTGACAGGGAGAAGAAGAAAAAAGAAGAAAGGGCGCAACCACAGAAGGCTAATGAGGCCGTTTCAAAATGTTTGGGACAACAATTGTCTGTTATGTAG 900 0.3978 MAALTSLSFSATTQCSQRKSTLPSSSTRFLASSSDFFGIRIDSSYYHHVGVRAANSSSKMVIQCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHLMRYKTSYRYDPVFALGFVTVYDKLMEGYSSEEERDVIFKAYINALKEDPEQYRIDAQKLEEWARTQNSTSLVEFSSKEGEIEGILKDIAQRAGGKGEFSYSRFFAVGLFRLLELANATEPTILDKLTAALNIDKKSVDRDLDVYRMLLSKLVQAKELLKEYIDREKKKKEERAQPQKANEAVSKCLGQQLSVM* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4202 299 Coils Coil 257 280 - -
Tpr7g4202 299 Pfam Thylakoid formation protein 74 278 IPR017499 GO:0010207|GO:0015979
Tpr7g4202 299 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 289 - -
Tpr7g4202 299 Hamap Protein Thf1 [thf1]. 68 276 IPR017499 GO:0010207|GO:0015979
Tpr7g4202 299 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 289 IPR017499 GO:0010207|GO:0015979
Tpr7g4202 299 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 70 275 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4202 Tpr-Chr7 51095263 51099083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4202 - - gmx:100814341 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4202 7 51095263 51099083 Tpr7g4202 7 51095263 51099083 ECH
Tpr7g4202 7 51095263 51099083 Tpr7g4202 7 51095263 51099083 PCT