Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4184 ATGGATGGAATTGGCAAAGGAATTGATTTTGAAGATTTGTTACCGGTGATCGCGAATAAGTTAGGTGGTGAAGGATTAATGAAGGAACTAAGTAATGGGTTTAAGTTACTTATGGATAAAGACAAAGGTGTGATTACTTTGGAGAGTTTAAGGAAAAATTCTGCATTGATGGGTTTACAAGATTTGAAGGAAGATGAACTTTTGAGTATGATGAGAGAAGGTGATATTGATGGTGATGGTGCACTTACTGAAATGGAGTTTTGTGTTTTGATGTTTAGATTGAGTCCTCAATTGATGGAAGAATCATGGTTTTTGCTTGAAGAAGCATTGGATTATGAACTCAATTAA 348 0.3477 MDGIGKGIDFEDLLPVIANKLGGEGLMKELSNGFKLLMDKDKGVITLESLRKNSALMGLQDLKEDELLSMMREGDIDGDGALTEMEFCVLMFRLSPQLMEESWFLLEEALDYELN* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4184 115 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Tpr7g4184 115 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Tpr7g4184 115 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 114 - -
Tpr7g4184 115 PANTHER CALCIUM-BINDING PROTEIN KIC 1 114 IPR044205 GO:0005509
Tpr7g4184 115 SMART efh_1 66 94 IPR002048 GO:0005509
Tpr7g4184 115 SUPERFAMILY EF-hand 6 101 IPR011992 -
Tpr7g4184 115 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Tpr7g4184 115 Gene3D - 8 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4184 Tpr-Chr7 50938797 50939559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4184 10 114 EF-hand Containing Proteins AT5G54490 59.434 5.93e-40 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4184 K24345 - gmx:100808976 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4184 7 50938797 50939559 Tpr7g4184 7 50938797 50939559 ECH