Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4178 ATGCATGCAAATACAATGGCTGTTACTCAAATTAGAGTTAATTCATATCTTACAAACTCACTTTCTAGTTTCAATTCTTGGAATTTCACTAATAAATCACGGATCTTATCGCTACAAAAATCAAACTCAAGGATTATGATGCATGGTAAATTATCCATCAAGTCCATTGCTCTCAATGACAAGTTGGCACCTTTACAAATTGATGATAAGACCAAAAATTTGGATAAAGTGAAAAGAATGAGCCAAGAAGCATTGTTAAAGTCGAGTGATCCAATGGTAACATTGAAGATGATCGACTCAATCCAAGGGCTAGGAATTGGTCACCATTTGGAAGATGAGATTAATGTACAACTTAGGAGGATATGTGATTGGGACCGTTCTAATGACCTTTTTGCTACATCACTTCAATTTCGGTTGCTAAGGCATAACGGCTGGTCAACAAGTTCTGACATATTCAAGAAATTCTTGGACAAGAGTGGCAATTTCAAGGAGTCACTGACCAAAGACATTTGGGGTATGTTGAATCTATATGAGGCATCATATTTAGGGACAGAAGATGAAGAAGTATTAAAGAAAGCAATGGAATTTTCAAGGGCTCACCTAAAAGAGTTGATTCCACATCTTAATCCTCAAGTAAGTAGGTGCATTGAAAGATCTTTAACACTTCCAAAGCACCTAAGAATGGTCAGATTAGAAGCTAGAAATTACATGGAAGAATATAGTCAAGCAAGTAACCAAATACCAGCTCTTTTGGAATTGGCAAAGATAGACTCTGACATGATTCAGTCATTACACCAAAGAGAATTAGCAGAAATATGCAGGTGGTGGAAAGAGTTGGGCCTGGTTGACAAACTTGGTTTTGCAAGAGATAGACCAACAGAGTGCTTCTTGTGGACAGTGGGGCTTTTTCCAGAACCATGTTATTCAAATTGCCGTATTGAACTTACAAAAACTATCTCCATTTTGCTAGTTATGGATGACATCTTTGATACATATGGCACATTAGATGAACTTGTTCTTTTCACAAATGCAATTAAAAGGTGGGACCTTGATGCAATGGAGCAACTTCCTGAATACATGAAGATATGCTATATGGCATTATATAATACCACAAATGAAATTGCATATAGAATTCAAAAAGAACGTGGGCTAACTGTTGTTTCCCATTTAAAAAGAACATGGATTGACATATTTGAAGCATTTCTTGAAGAAGCTAAATGGTTCAATAGTGGATATGTGCCAAGTTTTAAGACATATTTGGATAATGGGGTGATTTCTGCTGGATCATGCATGGCATTGGTGCATACATTTTTTCTCATTGGTGATGGTCTCTCAAATGAAAACATTACAACGATGAAGCCATATCCTAGACTCTTCTCTTGCTCCGGAGAAATTCTACGACTATGGGATGACTTAGGAACTTCAACGGAGGAACAAGAAAGAGGGGATAATGCTAGCAGCATAGAATGCTTTATGGGAGAAAATAACATTTTAGATGAAAATGAAGGAAGGAAACACATAAGGCATCTAATAAGGAACTTGTGGCAAGAGCTCAATGGTCTTGCTATGACCGGAACATTACCTTTGTCTATTGTAAAAGCTTCTCTTAACATGGCTAGAACTGCTCAAGTTATTTATCAACATGGAGATGATAAAAGCACTTTTACTGTTGATGACTATGTGCAAACATTGATCTTCACATCATTACCTACTAGCTATATCCATTGA 1728 0.3669 MHANTMAVTQIRVNSYLTNSLSSFNSWNFTNKSRILSLQKSNSRIMMHGKLSIKSIALNDKLAPLQIDDKTKNLDKVKRMSQEALLKSSDPMVTLKMIDSIQGLGIGHHLEDEINVQLRRICDWDRSNDLFATSLQFRLLRHNGWSTSSDIFKKFLDKSGNFKESLTKDIWGMLNLYEASYLGTEDEEVLKKAMEFSRAHLKELIPHLNPQVSRCIERSLTLPKHLRMVRLEARNYMEEYSQASNQIPALLELAKIDSDMIQSLHQRELAEICRWWKELGLVDKLGFARDRPTECFLWTVGLFPEPCYSNCRIELTKTISILLVMDDIFDTYGTLDELVLFTNAIKRWDLDAMEQLPEYMKICYMALYNTTNEIAYRIQKERGLTVVSHLKRTWIDIFEAFLEEAKWFNSGYVPSFKTYLDNGVISAGSCMALVHTFFLIGDGLSNENITTMKPYPRLFSCSGEILRLWDDLGTSTEEQERGDNASSIECFMGENNILDENEGRKHIRHLIRNLWQELNGLAMTGTLPLSIVKASLNMARTAQVIYQHGDDKSTFTVDDYVQTLIFTSLPTSYIH* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4178 575 CDD Terpene_cyclase_plant_C1 76 566 IPR044814 GO:0010333|GO:0016102
Tpr7g4178 575 Coils Coil 226 246 - -
Tpr7g4178 575 Gene3D - 90 246 IPR036965 GO:0010333|GO:0016829
Tpr7g4178 575 SFLD Isoprenoid Synthase Type I 249 567 - -
Tpr7g4178 575 SUPERFAMILY Terpenoid synthases 248 554 IPR008949 -
Tpr7g4178 575 Pfam Terpene synthase, N-terminal domain 68 219 IPR001906 GO:0010333|GO:0016829
Tpr7g4178 575 Gene3D Farnesyl Diphosphate Synthase 69 554 IPR008949 -
Tpr7g4178 575 PANTHER OS04G0344100 PROTEIN-RELATED 68 569 - -
Tpr7g4178 575 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 71 244 IPR008930 -
Tpr7g4178 575 SFLD Terpene Cyclase Like 1 C Terminal Domain 249 567 IPR034741 -
Tpr7g4178 575 Pfam Terpene synthase family, metal binding domain 251 517 IPR005630 GO:0000287|GO:0010333|GO:0016829
Tpr7g4178 575 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 68 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4178 Tpr-Chr7 50870524 50888875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4178 - - gmx:100807904 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4178 7 50870524 50888875 Tpr7g4178 7 50870524 50888875 ECH
Tpr7g4178 7 50870524 50888875 Tpr7g4178 7 50870524 50888875 PCT