Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4141 ATGGCTTCTCTCAGAGCAACAAGGTCCAAACTATTCCCTCTTTCTAGAACCTTCTCTTCACCTCTCGCTCGTTCTTCTCCCGTTCGATCTCCTGCTTTTTCCTCATCCGCCGCCGCTAACGCCGCCCGTTCCACCGTCAACCGTTGGAGCCATGGCGTCCTTTGGAGATCTCCTTTCTCTCTCCGTCCTCAGATCAGAGCCGTCGCTCCTTTCATCGAACAGTTTCACCGCAAAATCGCCACCTCCGCTGGTGAAAATCCTTTCAAAGGAAACTTGACAAGTCTCCCCAAGCCTGGCGGCGGTGAATTTGGAAAGTTCTATAGTCTTCCTTCTCTCAAAGACCCGAGAATTGATAGGTTACCTTACTCTATCAGAATTCTCCTTGAATCTGCAATTCGTAATTGTGACAATTTCCAAGTTACTAAAGAAGATGTTGAAAAGATTCTTGACTGGGAAAAAACTGCTGTAAAGCAAGTTGAGATCCCTTTCAAGCCTGCTCGTGTTCTCCTGCAGGATTTTACTGGAGTCCCAGCTGTAGTTGATCTGGCTGTCATGCGTGATGCTATGAATAAGCTTGGCAGTGATTCTAATAAAATCAATCCTTTGGTTCCCGTTGATCTTGTCGTTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAGAATGCAGTTCAGGCTAATATGGAGCTTGAGTTCCAGAGAAACAAGGAGAGATTTTCTTTTCTTAAATGGGGATCAACTGCTTTCCGTAATATGCTAGTTGTTCCTCCTGGTTCTGGTATAGTACACCAGGTCAATCTCGAATATCTTGGACGAGTTGTTTTCAACAATGAGGGGTTACTCTATCCTGACAGTGTGGTTGGGACCGATTCACATACAACTATGATCGATGGGCTTGGAGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCAGAGGCAGCGATGCTTGGCCAGCCTATGAGCATGGTATTACCTGGTGTTGTTGGGTTCAAGTTGTCTGGGAAATTGCGCAATGGTGTTACAGCAACTGACTTGGTTCTAACCGTCACACAAATTCTTAGGAAACATGGTGTTGTAGGGAAATTCGTTGAATTTTATGGTAATCAAGTTCTCTTGTATTTCATTTCCTCCTTATTTTTAGCCTGTACTTGTCTATTTACCTGGTTTCACGGATTCTTTTATCTAGGCAATGGTATGGGTGAATTATCATTAGCTGACAGGGCTACCATTGCCAATATGTCTCCTGAATATGGAGCAACCATGGGTTTCTTCCCCGTAGATCATGTAACATTACAATACCTCAAACTAACCGGAAGAAGTGACGAGACTGTGGAAATGATAGAGTCCTATCTCAGGGCAAACAAGTTGTTTGTCGACTATAATGAGCCTCAACAAGACAGAGCTTATTCATCCTATCTTGAATTGAATCTCGATGAAGTCGAACCATGTATCTCTGGACCAAAGAGACCTCATGATCGTGTGCCTTTGAAAGAAATGAAGGCCGATTGGCGTGCTTGTCTTGATAACAAAGTGGGATTTAAGGGATTTGCTATACCAAAAGAAGCACAAGGCAAAGTTGCAAAATTTGATTTCCATGGGCAGCCAGCTGAGCTTAAACATGGCAGCGTTGTGATTGCTGCAATCACAAGTTGTACAAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTTGCAAAGAAGGCTCATGACTTAGGGTTGAAGGTTAAGCCTTGGGTAAAAACAAGTCTTGCTCCTGGTTCAGGAGTTGTTACCAAATACCTAATTCAGAGTGGCCTACAAAAGTATCTAAATGAACAGGGTTTCAATATTGTTGGATTTGGTTGTACCACATGTATCGGCAATTCAGGGGATCTAGACCAATCAGTTTCTGCTGCTATCTCAGAAAATGACATAGTAGCGTCTGCTGTGCTGTCAGGGAACCGTAATTTTGAGGGCCGAGTGCATCCCTTGACCCGTGCTAACTATCTCGCCTCACCTCCTTTGGTTGTTGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAAAAGGAGCCATTGGGGACAGGTAAGGACGGCAAGAATGTCTACTTGAGGGATATTTGGCCATCCACAGAAGAAATTGCACAGACTGTCCAATCCAGTGTGTTACCTGACATGTTCCGAAAAACATATGAATCTATTACCAAGGGTAATCCTATGTGGAACGAACTACAAGTTCCTGCTGAGAAGCTGTACTCATGGGACCCCAACTCAACATATATTCACGAGCCTCCATACTTCAAGGACATGACCATGGATCCTCCTGGACCTCATGGTGTGAAAGATGCCTATTGCCTGCTGAACTTTGGTGACAGCATAACAACTGATCACATTTCTCCTGCTGGAAACATTAACAAGGACAGTCCTGCTGCACAATACCTTGTCCAGCGCGGGGTGGAAAGGAAAGACTTCAACTCTTATGGAAGCCGTCGTGGCAACGATGAAGTTATGTCCAGGGGAACGTTTGCCAACATACGTATTGTAAACAAGCTCTTGAATGGGGAAGTGGGCCCAAAAACGGTTCACGTTCCAACAGGGGAGAAGCTTTTTGTTTTTGATGCAGCAGAGAGATACAAGGCTGCAGGGCATGCCACCATTGTGCTGGCTGGAGCTGAATACGGCAGTGGAAGTTCCAGGGATTGGGCTGCCAAGGGTCCCATGTTATTGGGAGTCAAAGCTGTGATATCCAAAAGTTTTGAGAGGATTCATCGCAGTAATTTGGTGGGAATGGGTATTATTCCCCTTTGCTTCAAATCTGGCGAGGATGCTGACACCTTGGGATTGACTGGTCACGAACGTTATACCATTGACCTTCCAAATAAAATCAGCGAGATAAAGCCTGGCCAAGACGTCACTGTCACAACCGATAACGGAAAATCTTTCACCTGCACAGCTCGCTTTGATACTGAGGTGGAATTGGAGTACTTTAACCATGGAGGCATCCTTCCCTATGTCATCAGGAACCTCATTAATAAGCAGTGA 3030 0.4498 MASLRATRSKLFPLSRTFSSPLARSSPVRSPAFSSSAAANAARSTVNRWSHGVLWRSPFSLRPQIRAVAPFIEQFHRKIATSAGENPFKGNLTSLPKPGGGEFGKFYSLPSLKDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKILDWEKTAVKQVEIPFKPARVLLQDFTGVPAVVDLAVMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFSFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGNQVLLYFISSLFLACTCLFTWFHGFFYLGNGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVEMIESYLRANKLFVDYNEPQQDRAYSSYLELNLDEVEPCISGPKRPHDRVPLKEMKADWRACLDNKVGFKGFAIPKEAQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHDLGLKVKPWVKTSLAPGSGVVTKYLIQSGLQKYLNEQGFNIVGFGCTTCIGNSGDLDQSVSAAISENDIVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPLGTGKDGKNVYLRDIWPSTEEIAQTVQSSVLPDMFRKTYESITKGNPMWNELQVPAEKLYSWDPNSTYIHEPPYFKDMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGNINKDSPAAQYLVQRGVERKDFNSYGSRRGNDEVMSRGTFANIRIVNKLLNGEVGPKTVHVPTGEKLFVFDAAERYKAAGHATIVLAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPNKISEIKPGQDVTVTTDNGKSFTCTARFDTEVELEYFNHGGILPYVIRNLINKQ* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4141 1009 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 53 370 IPR006249 -
Tpr7g4141 1009 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 394 1007 IPR006249 -
Tpr7g4141 1009 SUPERFAMILY Aconitase iron-sulfur domain 394 743 IPR036008 -
Tpr7g4141 1009 Pfam Aconitase C-terminal domain 807 934 IPR000573 -
Tpr7g4141 1009 PANTHER ACONITATE HYDRATASE 394 1007 - -
Tpr7g4141 1009 PANTHER ACONITATE HYDRATASE 53 370 - -
Tpr7g4141 1009 SUPERFAMILY Aconitase iron-sulfur domain 100 370 IPR036008 -
Tpr7g4141 1009 Gene3D Aconitase, domain 4 771 1007 IPR015928 -
Tpr7g4141 1009 Pfam Aconitase family (aconitate hydratase) 394 678 IPR001030 -
Tpr7g4141 1009 Pfam Aconitase family (aconitate hydratase) 146 370 IPR001030 -
Tpr7g4141 1009 SUPERFAMILY LeuD/IlvD-like 747 1005 - -
Tpr7g4141 1009 CDD AcnA_IRP 167 680 - -
Tpr7g4141 1009 ProSitePatterns Aconitase family signature 2. 609 622 IPR018136 -
Tpr7g4141 1009 Gene3D Aconitase, domain 3 483 706 IPR015931 -
Tpr7g4141 1009 ProSitePatterns Aconitase family signature 1. 543 559 IPR018136 -
Tpr7g4141 1009 Gene3D - 707 768 - -
Tpr7g4141 1009 PRINTS Aconitase family signature 228 241 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 252 260 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 281 294 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 295 310 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 357 370 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 547 558 IPR001030 -
Tpr7g4141 1009 PRINTS Aconitase family signature 609 622 IPR001030 -
Tpr7g4141 1009 CDD AcnA_IRP_Swivel 784 954 IPR044137 -
Tpr7g4141 1009 Gene3D Aconitase, domain 3 390 482 IPR015931 -
Tpr7g4141 1009 Gene3D Aconitase, domain 3 85 374 IPR015931 -
Tpr7g4141 1009 TIGRFAM aconitase_1: aconitate hydratase 1 394 1006 IPR006249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4141 Tpr-Chr7 50525972 50534294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4141 K01681 - gmx:100810088 1737.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4141 7 50525972 50534294 Tpr7g4141 7 50525972 50534294 ECH
Tpr7g4141 7 50525972 50534294 Tpr7g4141 7 50525972 50534294 PCT
Tpr4g1412 4 13772796 13781629 Tpr7g4141 7 50525972 50534294 PCT